Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:161036051-161226652

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gas5 1 161035166 to 161038537 3371 + lncRNA gene growth arrest specific 5
Tssr9677 1 161036053 to 161036066 13 + TSS region transcription start site region 9677
Gm22357 1 161036057 to 161036139 82 + snoRNA gene predicted gene, 22357
Gm23212 1 161036682 to 161036741 59 + snoRNA gene predicted gene, 23212
Snord78 1 161036984 to 161037049 65 + snoRNA gene small nucleolar RNA, C/D box 78
Mir5117 1 161037356 to 161037439 83 + miRNA gene microRNA 5117
Tssr9678 1 161037602 to 161037613 11 + TSS region transcription start site region 9678
Snord80 1 161037604 to 161037680 76 + snoRNA gene small nucleolar RNA, C/D box 80
Snord47 1 161038092 to 161038156 64 + snoRNA gene small nucleolar RNA, C/D box 47
Gm25789 1 161038308 to 161038383 75 + snoRNA gene predicted gene, 25789
Tssr14567 1 161038530 to 161038537 7 - TSS region transcription start site region 14567
Dars2 1 161040601 to 161070658 30057 - protein coding gene aspartyl-tRNA synthetase 2 (mitochondrial)
Gm37634 1 161040620 to 161041414 794 + antisense lncRNA gene predicted gene, 37634
Cpgi922 1 161070141 to 161071164 1023 CpG island CpG island 922
Tssr14568 1 161070613 to 161070674 61 - TSS region transcription start site region 14568
Cenpl 1 161070767 to 161086724 15957 + protein coding gene centromere protein L
Tssr9679 1 161070924 to 161071006 82 + TSS region transcription start site region 9679
Tssr14569 1 161071195 to 161071232 37 - TSS region transcription start site region 14569
Tssr14570 1 161071405 to 161071417 12 - TSS region transcription start site region 14570
Klhl20 1 161088375 to 161131510 43135 - protein coding gene kelch-like 20
Cpgi923 1 161131051 to 161131652 601 CpG island CpG island 923
Tssr14571 1 161131428 to 161131486 58 - TSS region transcription start site region 14571
Cpgi924 1 161142549 to 161143025 476 CpG island CpG island 924
Tssr9680 1 161142661 to 161142701 40 + TSS region transcription start site region 9680
Ankrd45 1 161142691 to 161170498 27807 + protein coding gene ankyrin repeat domain 45
Tssr9681 1 161142706 to 161142744 38 + TSS region transcription start site region 9681
Tssr9682 1 161150984 to 161150988 4 + TSS region transcription start site region 9682
Tex50 1 161156843 to 161159314 2471 - protein coding gene testis expressed 50
Tssr14572 1 161156955 to 161156956 1 - TSS region transcription start site region 14572
Tssr14573 1 161159310 to 161159314 4 - TSS region transcription start site region 14573
Cpgi925 1 161170592 to 161171070 478 CpG island CpG island 925
Tssr9683 1 161175601 to 161175620 19 + TSS region transcription start site region 9683
Tssr9684 1 161175629 to 161175641 12 + TSS region transcription start site region 9684
Gm6185 1 161178704 to 161235173 56469 + pseudogene predicted gene 6185