Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:160254725-160900799

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rabgap1l 1 160219174 to 160793211 574037 - protein coding gene RAB GTPase activating protein 1-like
Gm36975 1 160264324 to 160443072 178748 + antisense lncRNA gene predicted gene, 36975
Tssr14540 1 160287376 to 160287379 3 - TSS region transcription start site region 14540
C230094B09Rik 1 160288604 to 160293360 4756 unclassified gene RIKEN cDNA C230094B09 gene
Mir1927 1 160295864 to 160295972 108 - miRNA gene microRNA 1927
Tssr14541 1 160307304 to 160307322 18 - TSS region transcription start site region 14541
Tssr14542 1 160307324 to 160307349 25 - TSS region transcription start site region 14542
Tssr14543 1 160307351 to 160307391 40 - TSS region transcription start site region 14543
Tssr14544 1 160307400 to 160307419 19 - TSS region transcription start site region 14544
Tssr14545 1 160307420 to 160307437 17 - TSS region transcription start site region 14545
Tssr14546 1 160307439 to 160307452 13 - TSS region transcription start site region 14546
Tssr14547 1 160307465 to 160307482 17 - TSS region transcription start site region 14547
Tssr14548 1 160309086 to 160309115 29 - TSS region transcription start site region 14548
Tssr14549 1 160309158 to 160309178 20 - TSS region transcription start site region 14549
9430087J23Rik 1 160315344 to 160316495 1151 - unclassified gene RIKEN cDNA 9430087J23 gene
Gm37529 1 160321686 to 160327078 5392 - sense intronic lncRNA gene predicted gene, 37529
Cpgi918 1 160351844 to 160352123 279 CpG island CpG island 918
Tssr14550 1 160351864 to 160351934 70 - TSS region transcription start site region 14550
Tssr14551 1 160351991 to 160352005 14 - TSS region transcription start site region 14551
Tssr14552 1 160352013 to 160352075 62 - TSS region transcription start site region 14552
Tssr14553 1 160352085 to 160352116 31 - TSS region transcription start site region 14553
Bpq8 1 160457095 to 160457233 138 QTL blood pressure QTL 8
Actre11 1 160457095 to 162012496 1555401 QTL activity response to ethanol 11
D1Mit105 1 160457095 to 160457233 138 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 105
D1Dcr15 1 160457129 to 160457228 99 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 15
D1Mit503 1 160517369 to 160517469 100 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 503
Gm37212 1 160570161 to 160573810 3649 - unclassified gene predicted gene, 37212
Gpr52 1 160574725 to 160580799 6074 - protein coding gene G protein-coupled receptor 52
Tssr14554 1 160577893 to 160577904 11 - TSS region transcription start site region 14554
Gm37215 1 160589882 to 160591140 1258 - unclassified gene predicted gene, 37215
Gm38302 1 160604115 to 160606190 2075 - unclassified gene predicted gene, 38302
6720464F23Rik 1 160608955 to 160612450 3495 - unclassified gene RIKEN cDNA 6720464F23 gene
Gm23528 1 160645573 to 160645704 131 + snoRNA gene predicted gene, 23528
Gm37873 1 160648023 to 160650302 2279 - unclassified gene predicted gene, 37873
Gm37328 1 160726042 to 160726681 639 - sense intronic lncRNA gene predicted gene, 37328
Gm38329 1 160727734 to 160728160 426 - unclassified gene predicted gene, 38329
Gm38126 1 160755687 to 160759689 4002 + unclassified gene predicted gene, 38126
Tssr14555 1 160784104 to 160784108 4 - TSS region transcription start site region 14555
Cpgi919 1 160791924 to 160793278 1354 CpG island CpG island 919
Tssr9644 1 160792194 to 160792243 49 + TSS region transcription start site region 9644
Tssr14556 1 160792767 to 160792781 14 - TSS region transcription start site region 14556
Tssr14557 1 160792799 to 160792832 33 - TSS region transcription start site region 14557
Tssr14558 1 160792833 to 160792878 45 - TSS region transcription start site region 14558
Tssr14559 1 160792881 to 160792892 11 - TSS region transcription start site region 14559
Tssr14560 1 160792908 to 160792969 61 - TSS region transcription start site region 14560
Tssr14561 1 160793198 to 160793211 13 - TSS region transcription start site region 14561
Gm37083 1 160798682 to 160800819 2137 + lincRNA gene predicted gene, 37083
Tssr14562 1 160813147 to 160813152 5 - TSS region transcription start site region 14562
Gm38060 1 160839168 to 160839631 463 + lincRNA gene predicted gene, 38060
Tssr14563 1 160842647 to 160842650 3 - TSS region transcription start site region 14563
Gm24988 1 160876202 to 160876322 120 - snoRNA gene predicted gene, 24988
Tssr14564 1 160878646 to 160878678 32 - TSS region transcription start site region 14564
Tssr9645 1 160881544 to 160881561 17 + TSS region transcription start site region 9645
Gm6177 1 160893120 to 160893584 464 + pseudogene predicted gene 6177