Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:160053571-160253585

35 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4930523C07Rik	1	160044368 to 160078587	34219	+	protein coding gene	RIKEN cDNA 4930523C07 gene
Tssr9639	1	160053856 to 160053870	14	+	TSS region	transcription start site region 9639
Tssr9640	1	160055067 to 160055072	5	+	TSS region	transcription start site region 9640
Tssr14522	1	160060639 to 160060650	11	-	TSS region	transcription start site region 14522
4930562F07Rik	1	160074735 to 160077985	3250	-	lincRNA gene	RIKEN cDNA 4930562F07 gene
Tssr14523	1	160077926 to 160077944	18	-	TSS region	transcription start site region 14523
D1Pgn12	1	160081429 to 160081625	196		DNA segment	DNA segment, Chr 1, Paigen 12
Tnn	1	160085029 to 160153580	68551	-	protein coding gene	tenascin N
D1Pgn1	1	160096747 to 160096968	221		DNA segment	DNA segment, Chr 1, Paigen 1
Tssr14524	1	160105725 to 160105731	6	-	TSS region	transcription start site region 14524
Tssr14525	1	160133698 to 160133708	10	-	TSS region	transcription start site region 14525
Cpgi915	1	160145971 to 160146383	412		CpG island	CpG island 915
Tssr14526	1	160153538 to 160153550	12	-	TSS region	transcription start site region 14526
Tssr14527	1	160153571 to 160153585	14	-	TSS region	transcription start site region 14527
Cpgi916	1	160194903 to 160195580	677		CpG island	CpG island 916
Tssr9641	1	160195237 to 160195266	29	+	TSS region	transcription start site region 9641
Mrps14	1	160195260 to 160201186	5926	+	protein coding gene	mitochondrial ribosomal protein S14
Cacybp	1	160202367 to 160212875	10508	-	protein coding gene	calcyclin binding protein
Tssr14528	1	160206190 to 160206200	10	-	TSS region	transcription start site region 14528
Cpgi917	1	160212282 to 160213518	1236		CpG island	CpG island 917
Tssr14529	1	160212611 to 160212623	12	-	TSS region	transcription start site region 14529
Tssr14530	1	160212691 to 160212714	23	-	TSS region	transcription start site region 14530
Tssr14531	1	160212716 to 160212858	142	-	TSS region	transcription start site region 14531
Tssr14532	1	160212864 to 160212873	9	-	TSS region	transcription start site region 14532
4933417C20Rik	1	160212943 to 160214816	1873	+	unclassified gene	RIKEN cDNA 4933417C20 gene
Tssr9642	1	160213092 to 160213147	55	+	TSS region	transcription start site region 9642
Rabgap1l	1	160219174 to 160793211	574037	-	protein coding gene	RAB GTPase activating protein 1-like
Tssr14533	1	160232727 to 160232733	6	-	TSS region	transcription start site region 14533
Tssr9643	1	160246238 to 160246246	8	+	TSS region	transcription start site region 9643
Tssr14534	1	160247615 to 160247637	22	-	TSS region	transcription start site region 14534
Tssr14535	1	160247647 to 160247661	14	-	TSS region	transcription start site region 14535
Tssr14536	1	160247673 to 160247680	7	-	TSS region	transcription start site region 14536
Tssr14537	1	160250090 to 160250119	29	-	TSS region	transcription start site region 14537
Tssr14538	1	160251409 to 160251424	15	-	TSS region	transcription start site region 14538
Tssr14539	1	160251437 to 160251481	44	-	TSS region	transcription start site region 14539