MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:160046747-160146968

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4930523C07Rik	1	160044368 to 160078587	34219	+	protein coding gene	RIKEN cDNA 4930523C07 gene
Tssr14516	1	160046969 to 160046971	2	-	TSS region	transcription start site region 14516
Tssr14517	1	160047498 to 160047508	10	-	TSS region	transcription start site region 14517
Tssr14518	1	160047510 to 160047517	7	-	TSS region	transcription start site region 14518
Tssr14519	1	160047734 to 160047748	14	-	TSS region	transcription start site region 14519
Tssr14520	1	160053070 to 160053081	11	-	TSS region	transcription start site region 14520
Tssr14521	1	160053096 to 160053110	14	-	TSS region	transcription start site region 14521
Tssr9639	1	160053856 to 160053870	14	+	TSS region	transcription start site region 9639
Tssr9640	1	160055067 to 160055072	5	+	TSS region	transcription start site region 9640
Tssr14522	1	160060639 to 160060650	11	-	TSS region	transcription start site region 14522
4930562F07Rik	1	160074735 to 160077985	3250	-	lincRNA gene	RIKEN cDNA 4930562F07 gene
Tssr14523	1	160077926 to 160077944	18	-	TSS region	transcription start site region 14523
D1Pgn12	1	160081429 to 160081625	196		DNA segment	DNA segment, Chr 1, Paigen 12
Tnn	1	160085029 to 160153580	68551	-	protein coding gene	tenascin N
D1Pgn1	1	160096747 to 160096968	221		DNA segment	DNA segment, Chr 1, Paigen 1
Tssr14524	1	160105725 to 160105731	6	-	TSS region	transcription start site region 14524
Tssr14525	1	160133698 to 160133708	10	-	TSS region	transcription start site region 14525
Cpgi915	1	160145971 to 160146383	412		CpG island	CpG island 915