Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:160045971-160246383

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930523C07Rik 1 160044368 to 160078587 34219 + protein coding gene RIKEN cDNA 4930523C07 gene
Tssr14516 1 160046969 to 160046971 2 - TSS region transcription start site region 14516
Tssr14517 1 160047498 to 160047508 10 - TSS region transcription start site region 14517
Tssr14518 1 160047510 to 160047517 7 - TSS region transcription start site region 14518
Tssr14519 1 160047734 to 160047748 14 - TSS region transcription start site region 14519
Tssr14520 1 160053070 to 160053081 11 - TSS region transcription start site region 14520
Tssr14521 1 160053096 to 160053110 14 - TSS region transcription start site region 14521
Tssr9639 1 160053856 to 160053870 14 + TSS region transcription start site region 9639
Tssr9640 1 160055067 to 160055072 5 + TSS region transcription start site region 9640
Tssr14522 1 160060639 to 160060650 11 - TSS region transcription start site region 14522
4930562F07Rik 1 160074735 to 160077985 3250 - lincRNA gene RIKEN cDNA 4930562F07 gene
Tssr14523 1 160077926 to 160077944 18 - TSS region transcription start site region 14523
D1Pgn12 1 160081429 to 160081625 196 DNA segment DNA segment, Chr 1, Paigen 12
Tnn 1 160085029 to 160153580 68551 - protein coding gene tenascin N
D1Pgn1 1 160096747 to 160096968 221 DNA segment DNA segment, Chr 1, Paigen 1
Tssr14524 1 160105725 to 160105731 6 - TSS region transcription start site region 14524
Tssr14525 1 160133698 to 160133708 10 - TSS region transcription start site region 14525
Cpgi915 1 160145971 to 160146383 412 CpG island CpG island 915
Tssr14526 1 160153538 to 160153550 12 - TSS region transcription start site region 14526
Tssr14527 1 160153571 to 160153585 14 - TSS region transcription start site region 14527
Cpgi916 1 160194903 to 160195580 677 CpG island CpG island 916
Tssr9641 1 160195237 to 160195266 29 + TSS region transcription start site region 9641
Mrps14 1 160195260 to 160201186 5926 + protein coding gene mitochondrial ribosomal protein S14
Cacybp 1 160202367 to 160212875 10508 - protein coding gene calcyclin binding protein
Tssr14528 1 160206190 to 160206200 10 - TSS region transcription start site region 14528
Cpgi917 1 160212282 to 160213518 1236 CpG island CpG island 917
Tssr14529 1 160212611 to 160212623 12 - TSS region transcription start site region 14529
Tssr14530 1 160212691 to 160212714 23 - TSS region transcription start site region 14530
Tssr14531 1 160212716 to 160212858 142 - TSS region transcription start site region 14531
Tssr14532 1 160212864 to 160212873 9 - TSS region transcription start site region 14532
4933417C20Rik 1 160212943 to 160214816 1873 + unclassified gene RIKEN cDNA 4933417C20 gene
Tssr9642 1 160213092 to 160213147 55 + TSS region transcription start site region 9642
Rabgap1l 1 160219174 to 160793211 574037 - protein coding gene RAB GTPase activating protein 1-like
Tssr14533 1 160232727 to 160232733 6 - TSS region transcription start site region 14533
Tssr9643 1 160246238 to 160246246 8 + TSS region transcription start site region 9643