Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:158097273-158956781

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pas8 1 147249520 to 158405702 11156182 QTL pulmonary adenoma susceptibility 8
Gm38256 1 157940385 to 158141318 200933 + unclassified gene predicted gene, 38256
Gm39686 1 158147695 to 158225278 77583 + lncRNA gene predicted gene, 39686
Brinp2 1 158245269 to 158356326 111057 - protein coding gene bone morphogenic protein/retinoic acid inducible neural-specific 2
Wbcq5 1 158267440 to 158267586 146 QTL white blood cell QTL 5
D1Mit227 1 158267440 to 158267586 146 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 227
D1Mit227.2 1 158267621 to 158267763 142 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 227.2
Tssr14492 1 158355240 to 158355243 3 - TSS region transcription start site region 14492
Cpgi909 1 158355706 to 158356574 868 CpG island CpG island 909
Tssr14493 1 158356258 to 158356313 55 - TSS region transcription start site region 14493
Tssr14494 1 158356324 to 158356344 20 - TSS region transcription start site region 14494
Tssr9598 1 158362089 to 158362102 13 + TSS region transcription start site region 9598
Tssr9599 1 158362180 to 158362192 12 + TSS region transcription start site region 9599
Tssr9600 1 158362261 to 158362296 35 + TSS region transcription start site region 9600
Astn1 1 158362273 to 158691781 329508 + protein coding gene astrotactin 1
Tssr9601 1 158362330 to 158362411 81 + TSS region transcription start site region 9601
Tssr9602 1 158362418 to 158362428 10 + TSS region transcription start site region 9602
Tssr9603 1 158362497 to 158362511 14 + TSS region transcription start site region 9603
Cpgi910 1 158362518 to 158363020 502 CpG island CpG island 910
Tssr9604 1 158362521 to 158362585 64 + TSS region transcription start site region 9604
Gm37861 1 158375936 to 158378804 2868 + unclassified gene predicted gene, 37861
Rd6m1 1 158405603 to 158405702 99 QTL retinal degeneration 6 modifier 1
D1Mit33 1 158405603 to 158405702 99 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 33
Femwf12 1 158405603 to 158405702 99 QTL femur work to failure 12
Pcir1 1 158405603 to 158405702 99 QTL periosteal circumference 1
Stia1 1 158405603 to 158405702 99 QTL serum transfer induced arthritis 1
Gm37679 1 158485032 to 158554299 69267 - antisense lncRNA gene predicted gene, 37679
Mir488 1 158505625 to 158505733 108 + miRNA gene microRNA 488
D1Mit349 1 158526229 to 158526342 113 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 349
Gm37367 1 158534807 to 158537408 2601 + unclassified gene predicted gene, 37367
Gm37848 1 158548864 to 158551966 3102 - unclassified gene predicted gene, 37848
Tssr9605 1 158551586 to 158551589 3 + TSS region transcription start site region 9605
Tssr9606 1 158691304 to 158691315 11 + TSS region transcription start site region 9606
Pappa2 1 158711727 to 158980490 268763 - protein coding gene pappalysin 2
Tssr14495 1 158712863 to 158712871 8 - TSS region transcription start site region 14495
Tssr14496 1 158712890 to 158712895 5 - TSS region transcription start site region 14496
Tssr14497 1 158712930 to 158712941 11 - TSS region transcription start site region 14497
Tssr14498 1 158822816 to 158822820 4 - TSS region transcription start site region 14498
Tssr14499 1 158828931 to 158828937 6 - TSS region transcription start site region 14499
Tssr14500 1 158887782 to 158887784 2 - TSS region transcription start site region 14500
Cpgi911 1 158935971 to 158936279 308 CpG island CpG island 911
Tssr14501 1 158953490 to 158953493 3 - TSS region transcription start site region 14501