Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:157440385-158641318

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pas8 1 147249520 to 158405702 11156182 QTL pulmonary adenoma susceptibility 8
Tssr9590 1 157440620 to 157440656 36 + TSS region transcription start site region 9590
Cpgi908 1 157458439 to 157458628 189 CpG island CpG island 908
Tssr9591 1 157458554 to 157458597 43 + TSS region transcription start site region 9591
Cryzl2 1 157458577 to 157492638 34061 + protein coding gene crystallin zeta like 2
Gm15486 1 157497931 to 157511721 13790 - antisense lncRNA gene predicted gene 15486
Sec16b 1 157506733 to 157568425 61692 + protein coding gene SEC16 homolog B (S. cerevisiae)
Tssr9592 1 157506757 to 157506776 19 + TSS region transcription start site region 9592
Tssr9593 1 157506777 to 157506811 34 + TSS region transcription start site region 9593
Tssr260 1 157526065 to 157526076 11 + TSS region transcription start site region 260
Tssr9594 1 157526078 to 157526092 14 + TSS region transcription start site region 9594
Tssr9595 1 157526099 to 157526119 20 + TSS region transcription start site region 9595
Tssr9596 1 157526127 to 157526153 26 + TSS region transcription start site region 9596
Tssr9597 1 157526156 to 157526186 30 + TSS region transcription start site region 9597
Gm30903 1 157589795 to 157594707 4912 - lncRNA gene predicted gene, 30903
Gm37682 1 157596306 to 157596827 521 + pseudogene predicted gene, 37682
Gm7412 1 157600811 to 157601415 604 - pseudogene predicted gene 7412
Gm34423 1 157616871 to 157621472 4601 + pseudogene predicted gene, 34423
Gm37713 1 157621272 to 157621469 197 + pseudogene predicted gene, 37713
Gm38213 1 157621964 to 157622136 172 - pseudogene predicted gene, 38213
Gm38256 1 157940385 to 158141318 200933 + unclassified gene predicted gene, 38256
D1Mit290 1 157951697 to 157951805 108 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 290
Gm39686 1 158147695 to 158225278 77583 + lncRNA gene predicted gene, 39686
Brinp2 1 158245269 to 158356326 111057 - protein coding gene bone morphogenic protein/retinoic acid inducible neural-specific 2
D1Mit227 1 158267440 to 158267586 146 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 227
Wbcq5 1 158267440 to 158267586 146 QTL white blood cell QTL 5
D1Mit227.2 1 158267621 to 158267763 142 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 227.2
Tssr14492 1 158355240 to 158355243 3 - TSS region transcription start site region 14492
Cpgi909 1 158355706 to 158356574 868 CpG island CpG island 909
Tssr14493 1 158356258 to 158356313 55 - TSS region transcription start site region 14493
Tssr14494 1 158356324 to 158356344 20 - TSS region transcription start site region 14494
Tssr9598 1 158362089 to 158362102 13 + TSS region transcription start site region 9598
Tssr9599 1 158362180 to 158362192 12 + TSS region transcription start site region 9599
Tssr9600 1 158362261 to 158362296 35 + TSS region transcription start site region 9600
Astn1 1 158362273 to 158691781 329508 + protein coding gene astrotactin 1
Tssr9601 1 158362330 to 158362411 81 + TSS region transcription start site region 9601
Tssr9602 1 158362418 to 158362428 10 + TSS region transcription start site region 9602
Tssr9603 1 158362497 to 158362511 14 + TSS region transcription start site region 9603
Cpgi910 1 158362518 to 158363020 502 CpG island CpG island 910
Tssr9604 1 158362521 to 158362585 64 + TSS region transcription start site region 9604
Gm37861 1 158375936 to 158378804 2868 + unclassified gene predicted gene, 37861
Rd6m1 1 158405603 to 158405702 99 QTL retinal degeneration 6 modifier 1
Femwf12 1 158405603 to 158405702 99 QTL femur work to failure 12
D1Mit33 1 158405603 to 158405702 99 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 33
Stia1 1 158405603 to 158405702 99 QTL serum transfer induced arthritis 1
Pcir1 1 158405603 to 158405702 99 QTL periosteal circumference 1
Gm37679 1 158485032 to 158554299 69267 - antisense lncRNA gene predicted gene, 37679
Mir488 1 158505625 to 158505733 108 + miRNA gene microRNA 488
D1Mit349 1 158526229 to 158526342 113 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 349
Gm37367 1 158534807 to 158537408 2601 + unclassified gene predicted gene, 37367
Gm37848 1 158548864 to 158551966 3102 - unclassified gene predicted gene, 37848
Tssr9605 1 158551586 to 158551589 3 + TSS region transcription start site region 9605