Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:156652576-158172621

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133 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Actre12 1 151007188 to 157361794 6354606 QTL activity response to ethanol 12
Tor3a 1 156653617 to 156674339 20722 - protein coding gene torsin family 3, member A
Tssr14455 1 156654237 to 156654272 35 - TSS region transcription start site region 14455
Tssr14456 1 156654350 to 156654377 27 - TSS region transcription start site region 14456
Tssr14457 1 156654498 to 156654509 11 - TSS region transcription start site region 14457
Tssr14458 1 156654516 to 156654535 19 - TSS region transcription start site region 14458
Tssr14459 1 156655727 to 156655765 38 - TSS region transcription start site region 14459
Tssr14460 1 156656507 to 156656533 26 - TSS region transcription start site region 14460
Tssr14461 1 156666818 to 156666830 12 - TSS region transcription start site region 14461
Cpgi899 1 156667239 to 156667501 262 CpG island CpG island 899
Tssr14462 1 156667477 to 156667490 13 - TSS region transcription start site region 14462
Tssr14463 1 156669612 to 156669637 25 - TSS region transcription start site region 14463
Tssr14464 1 156669675 to 156669685 10 - TSS region transcription start site region 14464
Tssr253 1 156671361 to 156671377 16 - TSS region transcription start site region 253
Tssr9576 1 156672876 to 156672894 18 + TSS region transcription start site region 9576
Cpgi900 1 156673500 to 156674732 1232 CpG island CpG island 900
Tssr14465 1 156674273 to 156674287 14 - TSS region transcription start site region 14465
Tssr14466 1 156674290 to 156674344 54 - TSS region transcription start site region 14466
Tssr14467 1 156674837 to 156674883 46 - TSS region transcription start site region 14467
Tssr9577 1 156674977 to 156675006 29 + TSS region transcription start site region 9577
Gm19918 1 156678545 to 156678944 399 + unclassified non-coding RNA gene predicted gene, 19918
Fam20b 1 156678545 to 156719027 40482 - protein coding gene family with sequence similarity 20, member B
Cpgi901 1 156718297 to 156719484 1187 CpG island CpG island 901
Tssr14468 1 156718894 to 156718935 41 - TSS region transcription start site region 14468
Tssr14469 1 156718946 to 156718973 27 - TSS region transcription start site region 14469
Tssr14470 1 156718989 to 156719021 32 - TSS region transcription start site region 14470
Tssr14471 1 156719058 to 156719076 18 - TSS region transcription start site region 14471
Tssr254 1 156723477 to 156723482 5 + TSS region transcription start site region 254
Tssr9578 1 156735727 to 156735736 9 + TSS region transcription start site region 9578
Gm39683 1 156744404 to 156753261 8857 + lncRNA gene predicted gene, 39683
Cpgi902 1 156748492 to 156748682 190 CpG island CpG island 902
Cpgi903 1 156752334 to 156752572 238 CpG island CpG island 903
Bmd1 1 156774467 to 189571420 32796953 QTL bone mineral density 1
Bpq2 1 156774467 to 156774646 179 QTL blood pressure QTL 2
Bmd5 1 156774467 to 156774646 179 QTL bone mineral density 5
Ccrs1 1 156774467 to 156774646 179 QTL corpus callosum hemisphere surface size 1
Cpfd1 1 156774467 to 156774646 179 QTL cerebellum pattern fissures, declival 1
D1Mit14 1 156774467 to 156774646 179 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 14
Tne1 1 156774467 to 156774646 179 QTL total number errors, hindlimb coordination test 1
Scgq1 1 156774467 to 176435127 19660660 QTL spontaneous crescentic glomerulonephritis QTL 1
Vtbt2 1 156774467 to 156774646 179 QTL vertebral trabecular bone trait 2
Hcs7 1 156774467 to 168358833 11584366 QTL hepatocarcinogenesis susceptibility 7
Leusq1 1 156774467 to 168358833 11584366 QTL leucocytosis susceptibility QTL 1
Leusq4 1 156774467 to 170976071 14201604 QTL leucocytosis susceptibility QTL 4
Lmr8 1 156774467 to 189571420 32796953 QTL leishmaniasis resistance 8
Lmr8a 1 156774467 to 156774646 179 QTL leishmaniasis resistance 8a
Skull2 1 156774467 to 156774646 179 QTL skull morphology 2
Gm15428 1 156793512 to 156793844 332 + pseudogene predicted pseudogene 15428
Ralgps2 1 156804166 to 156939626 135460 - protein coding gene Ral GEF with PH domain and SH3 binding motif 2
Tssr14472 1 156807421 to 156807425 4 - TSS region transcription start site region 14472
Tssr14473 1 156814810 to 156814815 5 - TSS region transcription start site region 14473
Gm28693 1 156835287 to 156837924 2637 - pseudogene predicted gene 28693
Tssr9579 1 156838903 to 156838912 9 + TSS region transcription start site region 9579
Tssr9580 1 156838915 to 156838978 63 + TSS region transcription start site region 9580
Angptl1 1 156839023 to 156861078 22055 + protein coding gene angiopoietin-like 1
Gm37802 1 156856217 to 156858859 2642 - unclassified gene predicted gene, 37802
Gm37943 1 156872177 to 156876120 3943 - unclassified non-coding RNA gene predicted gene, 37943
Tssr14474 1 156937836 to 156937842 6 - TSS region transcription start site region 14474
Cpgi904 1 156938710 to 156940229 1519 CpG island CpG island 904
Tssr14475 1 156938782 to 156938809 27 - TSS region transcription start site region 14475
Tssr14476 1 156938811 to 156938853 42 - TSS region transcription start site region 14476
Tssr14477 1 156939533 to 156939549 16 - TSS region transcription start site region 14477
Tssr14478 1 156939553 to 156939615 62 - TSS region transcription start site region 14478
Tssr14479 1 156939628 to 156939657 29 - TSS region transcription start site region 14479
Tssr9581 1 156939657 to 156939689 32 + TSS region transcription start site region 9581
4930439D14Rik 1 156939838 to 156940196 358 + antisense lncRNA gene RIKEN cDNA 4930439D14 gene
Tssr14480 1 156940026 to 156940040 14 - TSS region transcription start site region 14480
Gm28694 1 156972760 to 157054034 81274 - lincRNA gene predicted gene 28694
Gm39685 1 156982775 to 156989859 7084 - lncRNA gene predicted gene, 39685
Tssr255 1 156997150 to 156997155 5 - TSS region transcription start site region 255
D1Mit202 1 157040949 to 157041091 142 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 202
Gm10531 1 157043547 to 157045849 2302 + unclassified gene predicted gene 10531
Gm30568 1 157059461 to 157081631 22170 - lncRNA gene predicted gene, 30568
Tssr256 1 157072025 to 157072028 3 + TSS region transcription start site region 256
Cpgi905 1 157076363 to 157076531 168 CpG island CpG island 905
Cpgi906 1 157077274 to 157077665 391 CpG island CpG island 906
Tex35 1 157099139 to 157108680 9541 - protein coding gene testis expressed 35
Tssr14481 1 157108632 to 157108664 32 - TSS region transcription start site region 14481
Gm30694 1 157121521 to 157128922 7401 + pseudogene predicted gene, 30694
Rasal2 1 157135183 to 157412595 277412 - protein coding gene RAS protein activator like 2
8030448I15Rik 1 157156099 to 157156668 569 unclassified gene RIKEN cDNA 8030448I15 gene
Tssr14482 1 157244470 to 157244505 35 - TSS region transcription start site region 14482
Tssr14483 1 157244506 to 157244557 51 - TSS region transcription start site region 14483
Tssr14484 1 157256627 to 157256650 23 - TSS region transcription start site region 14484
Tssr14485 1 157256691 to 157256701 10 - TSS region transcription start site region 14485
Tssr14486 1 157256703 to 157256725 22 - TSS region transcription start site region 14486
Tssr257 1 157256775 to 157256787 12 - TSS region transcription start site region 257
Tssr14487 1 157256819 to 157256841 22 - TSS region transcription start site region 14487
Gm18302 1 157317932 to 157318477 545 - pseudogene predicted gene, 18302
Tssr14488 1 157332395 to 157332400 5 - TSS region transcription start site region 14488
Gm37788 1 157347339 to 157350043 2704 - unclassified gene predicted gene, 37788
Gm37578 1 157354474 to 157355650 1176 - unclassified gene predicted gene, 37578
D1Mit268 1 157361663 to 157361794 131 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 268
Tssr258 1 157363099 to 157363101 2 + TSS region transcription start site region 258
Gm19048 1 157364663 to 157365277 614 + pseudogene predicted gene, 19048
Gm6058 1 157383931 to 157384329 398 - pseudogene predicted gene 6058
Tssr9582 1 157388888 to 157388890 2 + TSS region transcription start site region 9582
Tssr259 1 157398233 to 157398241 8 - TSS region transcription start site region 259
Gm37060 1 157404325 to 157406721 2396 - unclassified gene predicted gene, 37060
Cpgi907 1 157411648 to 157413001 1353 CpG island CpG island 907
Tssr9583 1 157412254 to 157412263 9 + TSS region transcription start site region 9583
Tssr14489 1 157412258 to 157412302 44 - TSS region transcription start site region 14489
2810025M15Rik 1 157412352 to 157420236 7884 + lncRNA gene RIKEN cDNA 2810025M15 gene
Tssr9584 1 157412371 to 157412390 19 + TSS region transcription start site region 9584
Tssr14490 1 157412527 to 157412565 38 - TSS region transcription start site region 14490
Tssr14491 1 157412576 to 157412621 45 - TSS region transcription start site region 14491
Tssr9585 1 157412649 to 157412664 15 + TSS region transcription start site region 9585
Tssr9586 1 157412667 to 157412677 10 + TSS region transcription start site region 9586
Tssr9587 1 157412681 to 157412683 2 + TSS region transcription start site region 9587
Tssr9588 1 157412685 to 157412697 12 + TSS region transcription start site region 9588
Tssr9589 1 157412701 to 157412774 73 + TSS region transcription start site region 9589
Tssr9590 1 157440620 to 157440656 36 + TSS region transcription start site region 9590
Cpgi908 1 157458439 to 157458628 189 CpG island CpG island 908
Tssr9591 1 157458554 to 157458597 43 + TSS region transcription start site region 9591
Cryzl2 1 157458577 to 157492638 34061 + protein coding gene crystallin zeta like 2
Gm15486 1 157497931 to 157511721 13790 - antisense lncRNA gene predicted gene 15486
Sec16b 1 157506733 to 157568425 61692 + protein coding gene SEC16 homolog B (S. cerevisiae)
Tssr9592 1 157506757 to 157506776 19 + TSS region transcription start site region 9592
Tssr9593 1 157506777 to 157506811 34 + TSS region transcription start site region 9593
Tssr260 1 157526065 to 157526076 11 + TSS region transcription start site region 260
Tssr9594 1 157526078 to 157526092 14 + TSS region transcription start site region 9594
Tssr9595 1 157526099 to 157526119 20 + TSS region transcription start site region 9595
Tssr9596 1 157526127 to 157526153 26 + TSS region transcription start site region 9596
Tssr9597 1 157526156 to 157526186 30 + TSS region transcription start site region 9597
Gm30903 1 157589795 to 157594707 4912 - lncRNA gene predicted gene, 30903
Gm37682 1 157596306 to 157596827 521 + pseudogene predicted gene, 37682
Gm7412 1 157600811 to 157601415 604 - pseudogene predicted gene 7412
Gm34423 1 157616871 to 157621472 4601 + pseudogene predicted gene, 34423
Gm37713 1 157621272 to 157621469 197 + pseudogene predicted gene, 37713
Gm38213 1 157621964 to 157622136 172 - pseudogene predicted gene, 38213
Gm38256 1 157940385 to 158141318 200933 + unclassified gene predicted gene, 38256
D1Mit290 1 157951697 to 157951805 108 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 290
Gm39686 1 158147695 to 158225278 77583 + lncRNA gene predicted gene, 39686