Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:156485727-156825765

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39682 1 156476559 to 156500204 23645 + lncRNA gene predicted gene, 39682
Tssr252 1 156500399 to 156500411 12 + TSS region transcription start site region 252
Gm10031 1 156524012 to 156526664 2652 + protein coding gene predicted pseudogene 10031
Tssr9569 1 156524074 to 156524107 33 + TSS region transcription start site region 9569
Gm17975 1 156535104 to 156535635 531 + pseudogene predicted gene, 17975
Cpgi898 1 156558285 to 156559622 1337 CpG island CpG island 898
Tssr9570 1 156558759 to 156558806 47 + TSS region transcription start site region 9570
Abl2 1 156558786 to 156649568 90782 + protein coding gene v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)
Tssr9571 1 156558844 to 156558869 25 + TSS region transcription start site region 9571
Tssr14454 1 156559347 to 156559357 10 - TSS region transcription start site region 14454
Gm38043 1 156583108 to 156588248 5140 + unclassified gene predicted gene, 38043
Tssr9572 1 156615818 to 156615862 44 + TSS region transcription start site region 9572
Tssr9573 1 156615877 to 156615886 9 + TSS region transcription start site region 9573
Tssr9574 1 156615903 to 156615933 30 + TSS region transcription start site region 9574
D1Mit425 1 156624618 to 156624738 120 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 425
Cq1 1 156624618 to 156624738 120 QTL cholesterol QTL 1
Tssr9575 1 156634035 to 156634039 4 + TSS region transcription start site region 9575
Tor3a 1 156653617 to 156674339 20722 - protein coding gene torsin family 3, member A
Tssr14455 1 156654237 to 156654272 35 - TSS region transcription start site region 14455
Tssr14456 1 156654350 to 156654377 27 - TSS region transcription start site region 14456
Tssr14457 1 156654498 to 156654509 11 - TSS region transcription start site region 14457
Tssr14458 1 156654516 to 156654535 19 - TSS region transcription start site region 14458
Tssr14459 1 156655727 to 156655765 38 - TSS region transcription start site region 14459
Tssr14460 1 156656507 to 156656533 26 - TSS region transcription start site region 14460
Tssr14461 1 156666818 to 156666830 12 - TSS region transcription start site region 14461
Cpgi899 1 156667239 to 156667501 262 CpG island CpG island 899
Tssr14462 1 156667477 to 156667490 13 - TSS region transcription start site region 14462
Tssr14463 1 156669612 to 156669637 25 - TSS region transcription start site region 14463
Tssr14464 1 156669675 to 156669685 10 - TSS region transcription start site region 14464
Tssr253 1 156671361 to 156671377 16 - TSS region transcription start site region 253
Tssr9576 1 156672876 to 156672894 18 + TSS region transcription start site region 9576
Cpgi900 1 156673500 to 156674732 1232 CpG island CpG island 900
Tssr14465 1 156674273 to 156674287 14 - TSS region transcription start site region 14465
Tssr14466 1 156674290 to 156674344 54 - TSS region transcription start site region 14466
Tssr14467 1 156674837 to 156674883 46 - TSS region transcription start site region 14467
Tssr9577 1 156674977 to 156675006 29 + TSS region transcription start site region 9577
Gm19918 1 156678545 to 156678944 399 + unclassified non-coding RNA gene predicted gene, 19918
Fam20b 1 156678545 to 156719027 40482 - protein coding gene family with sequence similarity 20, member B
Cpgi901 1 156718297 to 156719484 1187 CpG island CpG island 901
Tssr14468 1 156718894 to 156718935 41 - TSS region transcription start site region 14468
Tssr14469 1 156718946 to 156718973 27 - TSS region transcription start site region 14469
Tssr14470 1 156718989 to 156719021 32 - TSS region transcription start site region 14470
Tssr14471 1 156719058 to 156719076 18 - TSS region transcription start site region 14471
Tssr254 1 156723477 to 156723482 5 + TSS region transcription start site region 254
Tssr9578 1 156735727 to 156735736 9 + TSS region transcription start site region 9578
Gm39683 1 156744404 to 156753261 8857 + lncRNA gene predicted gene, 39683
Cpgi902 1 156748492 to 156748682 190 CpG island CpG island 902
Cpgi903 1 156752334 to 156752572 238 CpG island CpG island 903
Ccrs1 1 156774467 to 156774646 179 QTL corpus callosum hemisphere surface size 1
Bmd5 1 156774467 to 156774646 179 QTL bone mineral density 5
D1Mit14 1 156774467 to 156774646 179 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 14
Bmd1 1 156774467 to 189571420 32796953 QTL bone mineral density 1
Bpq2 1 156774467 to 156774646 179 QTL blood pressure QTL 2
Leusq1 1 156774467 to 168358833 11584366 QTL leucocytosis susceptibility QTL 1
Leusq4 1 156774467 to 170976071 14201604 QTL leucocytosis susceptibility QTL 4
Tne1 1 156774467 to 156774646 179 QTL total number errors, hindlimb coordination test 1
Cpfd1 1 156774467 to 156774646 179 QTL cerebellum pattern fissures, declival 1
Skull2 1 156774467 to 156774646 179 QTL skull morphology 2
Scgq1 1 156774467 to 176435127 19660660 QTL spontaneous crescentic glomerulonephritis QTL 1
Lmr8a 1 156774467 to 156774646 179 QTL leishmaniasis resistance 8a
Lmr8 1 156774467 to 189571420 32796953 QTL leishmaniasis resistance 8
Hcs7 1 156774467 to 168358833 11584366 QTL hepatocarcinogenesis susceptibility 7
Vtbt2 1 156774467 to 156774646 179 QTL vertebral trabecular bone trait 2
Gm15428 1 156793512 to 156793844 332 + pseudogene predicted pseudogene 15428
Ralgps2 1 156804166 to 156939626 135460 - protein coding gene Ral GEF with PH domain and SH3 binding motif 2
Tssr14472 1 156807421 to 156807425 4 - TSS region transcription start site region 14472
Tssr14473 1 156814810 to 156814815 5 - TSS region transcription start site region 14473