MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:15535935-15836046

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Kcnb2	1	15287254 to 15723750	436496	+	protein coding gene	potassium voltage gated channel, Shab-related subfamily, member 2
Tssr5982	1	15545476 to 15545480	4	+	TSS region	transcription start site region 5982
Gm37138	1	15556249 to 15558337	2088	+	unclassified gene	predicted gene, 37138
9430087D07Rik	1	15570582 to 15571241	659		unclassified gene	RIKEN cDNA 9430087D07 gene
Cpgi50	1	15651115 to 15651377	262		CpG island	CpG island 50
Gm25227	1	15685935 to 15686046	111	-	snoRNA gene	predicted gene, 25227
Gm25168	1	15757832 to 15757963	131	+	snoRNA gene	predicted gene, 25168
Gm6060	1	15760122 to 15760668	546	-	pseudogene	predicted gene 6060
Gm28669	1	15760761 to 15760860	99	+	pseudogene	predicted gene 28669
Tssr5983	1	15803204 to 15803236	32	+	TSS region	transcription start site region 5983
Tssr5984	1	15803238 to 15803249	11	+	TSS region	transcription start site region 5984
Tssr5985	1	15803254 to 15803264	10	+	TSS region	transcription start site region 5985
Tssr5986	1	15804357 to 15804367	10	+	TSS region	transcription start site region 5986
Tssr5987	1	15804368 to 15804373	5	+	TSS region	transcription start site region 5987
Tssr5988	1	15804374 to 15804382	8	+	TSS region	transcription start site region 5988
Cpgi51	1	15805476 to 15806371	895		CpG island	CpG island 51
Tssr5989	1	15805623 to 15805632	9	+	TSS region	transcription start site region 5989
Tssr5990	1	15805639 to 15805675	36	+	TSS region	transcription start site region 5990
Terf1	1	15805646 to 15844052	38406	+	protein coding gene	telomeric repeat binding factor 1