Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:155248098-155997474

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31102 1 155243076 to 155256851 13775 + lncRNA gene predicted gene, 31102
Xpr1 1 155275701 to 155417415 141714 - protein coding gene xenotropic and polytropic retrovirus receptor 1
Tssr14354 1 155276376 to 155276381 5 - TSS region transcription start site region 14354
Tssr14355 1 155279356 to 155279370 14 - TSS region transcription start site region 14355
Tssr14356 1 155279407 to 155279424 17 - TSS region transcription start site region 14356
Tssr14357 1 155280434 to 155280438 4 - TSS region transcription start site region 14357
Gm22569 1 155315966 to 155316089 123 + miRNA gene predicted gene, 22569
D1Dcr13 1 155339386 to 155339486 100 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 13
Gm17974 1 155348551 to 155349053 502 + pseudogene predicted gene, 17974
Cpgi885 1 155416689 to 155417669 980 CpG island CpG island 885
Tssr14358 1 155417261 to 155417272 11 - TSS region transcription start site region 14358
Tssr14359 1 155417283 to 155417323 40 - TSS region transcription start site region 14359
Tssr14360 1 155417336 to 155417358 22 - TSS region transcription start site region 14360
Tssr14361 1 155417366 to 155417386 20 - TSS region transcription start site region 14361
Tssr14362 1 155417394 to 155417435 41 - TSS region transcription start site region 14362
D1Dcr14 1 155426075 to 155426170 95 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 14
Gm31713 1 155427015 to 155438508 11493 - lncRNA gene predicted gene, 31713
Tssr9536 1 155447467 to 155447483 16 + TSS region transcription start site region 9536
Gm31772 1 155449553 to 155459769 10216 + lncRNA gene predicted gene, 31772
Gm5532 1 155520173 to 155527111 6938 - lincRNA gene predicted gene 5532
Tssr14363 1 155527083 to 155527091 8 - TSS region transcription start site region 14363
Tssr14364 1 155527133 to 155527155 22 - TSS region transcription start site region 14364
Tssr14365 1 155527156 to 155527165 9 - TSS region transcription start site region 14365
Tssr14366 1 155527172 to 155527186 14 - TSS region transcription start site region 14366
Cpgi886 1 155557794 to 155558832 1038 CpG island CpG island 886
Acbd6 1 155558098 to 155687474 129376 + protein coding gene acyl-Coenzyme A binding domain containing 6
Tssr9537 1 155558112 to 155558232 120 + TSS region transcription start site region 9537
Tssr9538 1 155558319 to 155558402 83 + TSS region transcription start site region 9538
Tssr9539 1 155558411 to 155558421 10 + TSS region transcription start site region 9539
Tssr9540 1 155558497 to 155558552 55 + TSS region transcription start site region 9540
Lhx4 1 155698031 to 155751684 53653 - protein coding gene LIM homeobox protein 4
D1Mit34 1 155706491 to 155706677 186 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 34
Shali5 1 155706491 to 186261999 30555508 QTL survival time to hyperoxic acute lung injury 5
D1Dcr5 1 155713164 to 155713291 127 DNA segment DNA segment, Chr 1, Derry C. Roopenian 5
Cpgi887 1 155736290 to 155738274 1984 CpG island CpG island 887
Cpgi888 1 155740518 to 155743383 2865 CpG island CpG island 888
Tssr14367 1 155742001 to 155742046 45 - TSS region transcription start site region 14367
Tssr14368 1 155742125 to 155742136 11 - TSS region transcription start site region 14368
Tssr9541 1 155742509 to 155742515 6 + TSS region transcription start site region 9541
Tssr14369 1 155751719 to 155751738 19 - TSS region transcription start site region 14369
Gm37089 1 155766146 to 155766274 128 + pseudogene predicted gene, 37089
Qsox1 1 155778155 to 155812899 34744 - protein coding gene quiescin Q6 sulfhydryl oxidase 1
Tssr14370 1 155779096 to 155779101 5 - TSS region transcription start site region 14370
Gm37539 1 155789124 to 155789358 234 + unclassified gene predicted gene, 37539
Cpgi889 1 155812232 to 155813468 1236 CpG island CpG island 889
Tssr14371 1 155812805 to 155812857 52 - TSS region transcription start site region 14371
Tssr14372 1 155812859 to 155812883 24 - TSS region transcription start site region 14372
Tssr14373 1 155812890 to 155812906 16 - TSS region transcription start site region 14373
Tssr14374 1 155813043 to 155813056 13 - TSS region transcription start site region 14374
Gm37571 1 155818494 to 155859591 41097 + antisense lncRNA gene predicted gene, 37571
Cep350 1 155844964 to 155973255 128291 - protein coding gene centrosomal protein 350
Gm38038 1 155855449 to 155855707 258 + pseudogene predicted gene, 38038
Tssr14375 1 155861414 to 155861429 15 - TSS region transcription start site region 14375
Gm36934 1 155864960 to 155865265 305 + pseudogene predicted gene, 36934
Gm37383 1 155881802 to 155882546 744 - unclassified gene predicted gene, 37383
Tssr14376 1 155947714 to 155947719 5 - TSS region transcription start site region 14376
Gm23744 1 155954574 to 155954722 148 + snRNA gene predicted gene, 23744
Bmd1a 1 155962068 to 162317756 6355688 QTL bone mineral density 1a
Tlln 1 155962068 to 159562802 3600734 QTL tail length
D1Mit451 1 155962068 to 155962217 149 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 451
Tssr9542 1 155972500 to 155972549 49 + TSS region transcription start site region 9542
Cpgi890 1 155972544 to 155973804 1260 CpG island CpG island 890
Tssr14377 1 155973173 to 155973204 31 - TSS region transcription start site region 14377
Tssr14378 1 155973205 to 155973259 54 - TSS region transcription start site region 14378
Gm9694 1 155973318 to 155974506 1188 + unclassified gene predicted gene 9694
Tssr14379 1 155973355 to 155973372 17 - TSS region transcription start site region 14379