Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:154290731-154984501

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D1Mit523 1 154304366 to 154304485 119 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-523
n-R5s220 1 154311408 to 154311527 119 - rRNA gene nuclear encoded rRNA 5S 220
Gm18727 1 154323056 to 154323608 552 - pseudogene predicted gene, 18727
D1Mit201 1 154345076 to 154345195 119 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 201
Cacna1e 1 154390731 to 154884501 493770 - protein coding gene calcium channel, voltage-dependent, R type, alpha 1E subunit
Tssr14301 1 154394585 to 154394590 5 - TSS region transcription start site region 14301
Tssr14302 1 154395152 to 154395158 6 - TSS region transcription start site region 14302
Cpgi874 1 154398381 to 154398877 496 CpG island CpG island 874
D1Mit142 1 154524058 to 154524178 120 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 142
Tssr14303 1 154542381 to 154542414 33 - TSS region transcription start site region 14303
Cpgi875 1 154725658 to 154725971 313 CpG island CpG island 875
Tssr14304 1 154726376 to 154726387 11 - TSS region transcription start site region 14304
Cpgi876 1 154726434 to 154727298 864 CpG island CpG island 876
Tssr14305 1 154726456 to 154726461 5 - TSS region transcription start site region 14305
Tssr14306 1 154726660 to 154726668 8 - TSS region transcription start site region 14306
Tssr14307 1 154726688 to 154726700 12 - TSS region transcription start site region 14307
Tssr14308 1 154726704 to 154726714 10 - TSS region transcription start site region 14308
Tssr14309 1 154726718 to 154726741 23 - TSS region transcription start site region 14309
Tssr14310 1 154726746 to 154726772 26 - TSS region transcription start site region 14310
Cpgi877 1 154799193 to 154799692 499 CpG island CpG island 877
Tssr14311 1 154816906 to 154816926 20 - TSS region transcription start site region 14311
Tssr14312 1 154816931 to 154816955 24 - TSS region transcription start site region 14312
Tssr14313 1 154816956 to 154816973 17 - TSS region transcription start site region 14313
Tssr14314 1 154883983 to 154884000 17 - TSS region transcription start site region 14314
Tssr14315 1 154884006 to 154884019 13 - TSS region transcription start site region 14315
Tssr14316 1 154884170 to 154884179 9 - TSS region transcription start site region 14316
Tssr14317 1 154884185 to 154884197 12 - TSS region transcription start site region 14317
Cpgi878 1 154884322 to 154884741 419 CpG island CpG island 878
Tssr14318 1 154884346 to 154884357 11 - TSS region transcription start site region 14318
Tssr14319 1 154884375 to 154884390 15 - TSS region transcription start site region 14319
Tssr14320 1 154884393 to 154884417 24 - TSS region transcription start site region 14320
Tssr14321 1 154884477 to 154884485 8 - TSS region transcription start site region 14321
Tssr14322 1 154884500 to 154884513 13 - TSS region transcription start site region 14322
Tssr14323 1 154884520 to 154884530 10 - TSS region transcription start site region 14323
Gm30521 1 154905780 to 154929198 23418 - lncRNA gene predicted gene, 30521
D1Mit397 1 154908169 to 154908279 110 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 397
Gm41976 1 154911843 to 154914496 2653 + lncRNA gene predicted gene, 41976
Tssr14324 1 154929184 to 154929195 11 - TSS region transcription start site region 14324
Gm30602 1 154968466 to 154974985 6519 - lncRNA gene predicted gene, 30602