Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:154208381-154588877

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D1Mit42 1 154215380 to 154215632 252 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 42
4930452N14Rik 1 154241521 to 154256906 15385 - lincRNA gene RIKEN cDNA 4930452N14 gene
4930532M18Rik 1 154255689 to 154270416 14727 + lincRNA gene RIKEN cDNA 4930532M18 gene
Tssr9519 1 154256982 to 154256984 2 + TSS region transcription start site region 9519
Gm30465 1 154261674 to 154264071 2397 - lncRNA gene predicted gene, 30465
D1Mit450 1 154287720 to 154287837 117 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 450
D1Mit523 1 154304366 to 154304485 119 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-523
n-R5s220 1 154311408 to 154311527 119 - rRNA gene nuclear encoded rRNA 5S 220
Gm18727 1 154323056 to 154323608 552 - pseudogene predicted gene, 18727
D1Mit201 1 154345076 to 154345195 119 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 201
Cacna1e 1 154390731 to 154884501 493770 - protein coding gene calcium channel, voltage-dependent, R type, alpha 1E subunit
Tssr14301 1 154394585 to 154394590 5 - TSS region transcription start site region 14301
Tssr14302 1 154395152 to 154395158 6 - TSS region transcription start site region 14302
Cpgi874 1 154398381 to 154398877 496 CpG island CpG island 874
D1Mit142 1 154524058 to 154524178 120 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 142
Tssr14303 1 154542381 to 154542414 33 - TSS region transcription start site region 14303