Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:153854226-154026290

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr9497 1 153874335 to 153874354 19 + TSS region transcription start site region 9497
Teddm1b 1 153874345 to 153876871 2526 + protein coding gene transmembrane epididymal protein 1B
Tssr14292 1 153875012 to 153875045 33 - TSS region transcription start site region 14292
Gm38352 1 153889741 to 153892297 2556 - unclassified gene predicted gene, 38352
Tssr9498 1 153891732 to 153891740 8 + TSS region transcription start site region 9498
Teddm1a 1 153891742 to 153893058 1316 + protein coding gene transmembrane epididymal protein 1A
Tssr9499 1 153891837 to 153891844 7 + TSS region transcription start site region 9499
Gm38440 1 153893724 to 153899870 6146 - lncRNA gene predicted gene, 38440
Cpgi871 1 153899663 to 153901007 1344 CpG island CpG island 871
Tssr14293 1 153899727 to 153899742 15 - TSS region transcription start site region 14293
Mir8114 1 153899926 to 153900036 110 + miRNA gene microRNA 8114
Tssr9500 1 153899937 to 153899953 16 + TSS region transcription start site region 9500
Glul 1 153899944 to 153909723 9779 + protein coding gene glutamate-ammonia ligase (glutamine synthetase)
Tssr14294 1 153900198 to 153900210 12 - TSS region transcription start site region 14294
Tssr14295 1 153900464 to 153900492 28 - TSS region transcription start site region 14295
Tssr9501 1 153900559 to 153900568 9 + TSS region transcription start site region 9501
Tssr9502 1 153900572 to 153900601 29 + TSS region transcription start site region 9502
Tssr9503 1 153904616 to 153904629 13 + TSS region transcription start site region 9503
Tssr9504 1 153907930 to 153907944 14 + TSS region transcription start site region 9504
Tssr9505 1 153908393 to 153908412 19 + TSS region transcription start site region 9505
Tssr9506 1 153908499 to 153908503 4 + TSS region transcription start site region 9506
Tssr9507 1 153909176 to 153909189 13 + TSS region transcription start site region 9507
Tssr9508 1 153909199 to 153909210 11 + TSS region transcription start site region 9508
Tssr9509 1 153909229 to 153909241 12 + TSS region transcription start site region 9509
Tssr9510 1 153909457 to 153909471 14 + TSS region transcription start site region 9510
Gm29290 1 153939226 to 153941290 2064 + lincRNA gene predicted gene 29290
Gm30327 1 153991063 to 154024648 33585 + lncRNA gene predicted gene, 30327
Gm29291 1 154003396 to 154006221 2825 - lincRNA gene predicted gene 29291
Tssr9511 1 154010032 to 154010063 31 + TSS region transcription start site region 9511