Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:152902150-153102264

34 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smg7	1	152836995 to 152902646	65651	-	protein coding gene	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
Cpgi860	1	152901733 to 152904104	2371		CpG island	CpG island 860
Tssr14242	1	152902628 to 152902669	41	-	TSS region	transcription start site region 14242
Tssr14243	1	152902736 to 152902750	14	-	TSS region	transcription start site region 14243
Tssr14244	1	152902757 to 152902779	22	-	TSS region	transcription start site region 14244
Tssr9437	1	152902844 to 152902873	29	+	TSS region	transcription start site region 9437
Tssr9438	1	152902897 to 152902922	25	+	TSS region	transcription start site region 9438
Tssr14245	1	152903063 to 152903087	24	-	TSS region	transcription start site region 14245
Tssr14246	1	152903088 to 152903118	30	-	TSS region	transcription start site region 14246
Tssr9439	1	152903803 to 152903814	11	+	TSS region	transcription start site region 9439
Cpgi861	1	152904686 to 152904858	172		CpG island	CpG island 861
D1Mit47	1	152919071 to 152919261	190		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 47
Nba10	1	152919071 to 186706423	33787352		QTL	New Zealand Black autoimmunity 10
Skts8	1	152919071 to 152919261	190		QTL	skin tumor susceptibility 8
1700040K01Rik	1	152936604 to 152937041	437	+	lncRNA gene	RIKEN cDNA 1700040K01 gene
Gm8976	1	152949395 to 152950097	702	-	pseudogene	predicted gene 8976
Cpgi862	1	152954811 to 152956457	1646		CpG island	CpG island 862
Tssr9440	1	152954966 to 152955059	93	+	TSS region	transcription start site region 9440
Nmnat2	1	152954993 to 153119261	164268	+	protein coding gene	nicotinamide nucleotide adenylyltransferase 2
Lore8	1	153002150 to 153002264	114		QTL	loss of righting induced by ethanol 8
D1Mit500	1	153002150 to 153002264	114		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 500
D1Dcr12	1	153002158 to 153002254	96		DNA segment	DNA Segment, Chr 1, Derry C. Roopenian 12
Tssr9441	1	153009680 to 153009687	7	+	TSS region	transcription start site region 9441
D1Ertd182e	1	153039213 to 153039424	211		DNA segment	DNA segment, Chr 1, ERATO Doi 182, expressed
Gm28960	1	153066481 to 153089507	23026	-	antisense lncRNA gene	predicted gene 28960
Cpgi863	1	153071703 to 153071876	173		CpG island	CpG island 863
Tssr9442	1	153073694 to 153073729	35	+	TSS region	transcription start site region 9442
Tssr9443	1	153076422 to 153076426	4	+	TSS region	transcription start site region 9443
Tssr9444	1	153085616 to 153085624	8	+	TSS region	transcription start site region 9444
Tssr9445	1	153090322 to 153090365	43	+	TSS region	transcription start site region 9445
Tssr9446	1	153093461 to 153093504	43	+	TSS region	transcription start site region 9446
Tssr9447	1	153093950 to 153093990	40	+	TSS region	transcription start site region 9447
D1Dcr4	1	153094962 to 153095057	95		DNA segment	DNA segment, Chr 1, Derry C. Roopenian 4
Tssr9448	1	153099357 to 153099360	3	+	TSS region	transcription start site region 9448