Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:151620259-152560307

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam129a 1 151571373 to 151721939 150566 + protein coding gene family with sequence similarity 129, member A
Tssr9398 1 151632350 to 151632353 3 + TSS region transcription start site region 9398
Tssr9399 1 151677172 to 151677182 10 + TSS region transcription start site region 9399
Tssr9400 1 151678000 to 151678008 8 + TSS region transcription start site region 9400
D1Mit447 1 151690384 to 151690676 292 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 447
Tssr9401 1 151718596 to 151718646 50 + TSS region transcription start site region 9401
Gm41969 1 151736847 to 151742766 5919 + lncRNA gene predicted gene, 41969
2810414N06Rik 1 151748949 to 151755018 6069 - lincRNA gene RIKEN cDNA 2810414N06 gene
Cpgi852 1 151754938 to 151756078 1140 CpG island CpG island 852
Tssr14200 1 151754990 to 151755031 41 - TSS region transcription start site region 14200
Tssr9402 1 151755339 to 151755393 54 + TSS region transcription start site region 9402
Edem3 1 151755371 to 151822051 66680 + protein coding gene ER degradation enhancer, mannosidase alpha-like 3
Tssr9403 1 151755409 to 151755441 32 + TSS region transcription start site region 9403
Tssr9404 1 151755452 to 151755463 11 + TSS region transcription start site region 9404
Gm25279 1 151854823 to 151854955 132 - snRNA gene predicted gene, 25279
Tssr9405 1 151872092 to 151872094 2 + TSS region transcription start site region 9405
Gm28610 1 151875419 to 151887063 11644 + antisense lncRNA gene predicted gene 28610
1700025G04Rik 1 151884524 to 152090320 205796 - protein coding gene RIKEN cDNA 1700025G04 gene
D1Mit513 1 151891826 to 151892010 184 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 513
Tssr14201 1 151920970 to 151920971 1 - TSS region transcription start site region 14201
Tssr14202 1 151945283 to 151945288 5 - TSS region transcription start site region 14202
Tssr14203 1 151947320 to 151947325 5 - TSS region transcription start site region 14203
Tssr9406 1 151947712 to 151947720 8 + TSS region transcription start site region 9406
Tssr14204 1 152042680 to 152042686 6 - TSS region transcription start site region 14204
Tssr14205 1 152053212 to 152053231 19 - TSS region transcription start site region 14205
Tssr14206 1 152055270 to 152055313 43 - TSS region transcription start site region 14206
Cpgi853 1 152089608 to 152091251 1643 CpG island CpG island 853
Tssr14207 1 152090145 to 152090167 22 - TSS region transcription start site region 14207
Tssr14208 1 152090181 to 152090209 28 - TSS region transcription start site region 14208
Tssr14209 1 152090241 to 152090254 13 - TSS region transcription start site region 14209
Tssr14210 1 152090259 to 152090307 48 - TSS region transcription start site region 14210
Tssr14211 1 152090308 to 152090332 24 - TSS region transcription start site region 14211
Gm8964 1 152128585 to 152129389 804 + pseudogene predicted gene 8964
D1Dcr3 1 152142819 to 152142916 97 DNA segment DNA segment, Chr 1, Derry C. Roopenian 3
Gm36920 1 152214308 to 152289992 75684 - lncRNA gene predicted gene, 36920
Tssr9407 1 152229857 to 152229858 1 + TSS region transcription start site region 9407
Cpgi854 1 152275018 to 152275244 226 CpG island CpG island 854
Tssr14212 1 152287996 to 152288013 17 - TSS region transcription start site region 14212
Tssr14213 1 152288035 to 152288046 11 - TSS region transcription start site region 14213
Gm38238 1 152292183 to 152292528 345 - unclassified gene predicted gene, 38238
Gm41970 1 152331171 to 152333925 2754 - lncRNA gene predicted gene, 41970
Tsen15 1 152370735 to 152386682 15947 - protein coding gene tRNA splicing endonuclease subunit 15
Cpgi855 1 152386191 to 152386871 680 CpG island CpG island 855
Tssr14214 1 152386589 to 152386610 21 - TSS region transcription start site region 14214
Tssr14215 1 152386626 to 152386666 40 - TSS region transcription start site region 14215
Tssr14216 1 152386675 to 152386684 9 - TSS region transcription start site region 14216
Tssr14217 1 152386689 to 152386694 5 - TSS region transcription start site region 14217
Tssr9408 1 152399802 to 152399809 7 + TSS region transcription start site region 9408
Cpgi856 1 152399802 to 152400697 895 CpG island CpG island 856
Tssr9409 1 152399824 to 152399881 57 + TSS region transcription start site region 9409
Colgalt2 1 152399830 to 152510695 110865 + protein coding gene collagen beta(1-O)galactosyltransferase 2
Tssr9410 1 152399882 to 152399891 9 + TSS region transcription start site region 9410
Tssr9411 1 152399895 to 152399908 13 + TSS region transcription start site region 9411
Tssr245 1 152400704 to 152400739 35 - TSS region transcription start site region 245
Gm15618 1 152407074 to 152407525 451 - pseudogene predicted gene 15618
Tssr14218 1 152469386 to 152469389 3 - TSS region transcription start site region 14218
Tssr14219 1 152497645 to 152497657 12 - TSS region transcription start site region 14219
Rgl1 1 152516762 to 152766270 249508 - protein coding gene ral guanine nucleotide dissociation stimulator,-like 1
Tssr14220 1 152524828 to 152524844 16 - TSS region transcription start site region 14220
Tssr14221 1 152536450 to 152536485 35 - TSS region transcription start site region 14221
Tssr9412 1 152540858 to 152540905 47 + TSS region transcription start site region 9412
D1Ertd148e 1 152547270 to 152547470 200 DNA segment DNA segment, Chr 1, ERATO Doi 148, expressed
Tssr14222 1 152550602 to 152550616 14 - TSS region transcription start site region 14222
Tssr14223 1 152552594 to 152552598 4 - TSS region transcription start site region 14223
Tssr14224 1 152559743 to 152559748 5 - TSS region transcription start site region 14224