Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:150457524-151098435

39 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Prg4	1	150449412 to 150466165	16753	-	protein coding gene	proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
Tssr14157	1	150465563 to 150465604	41	-	TSS region	transcription start site region 14157
Tssr14158	1	150466160 to 150466170	10	-	TSS region	transcription start site region 14158
Tssr14159	1	150466191 to 150466236	45	-	TSS region	transcription start site region 14159
Gm41967	1	150472533 to 150474472	1939	+	lncRNA gene	predicted gene, 41967
Tssr9365	1	150496867 to 150496893	26	+	TSS region	transcription start site region 9365
Tssr14160	1	150502687 to 150502714	27	-	TSS region	transcription start site region 14160
Tssr14161	1	150503148 to 150503153	5	-	TSS region	transcription start site region 14161
Tssr9366	1	150517818 to 150517825	7	+	TSS region	transcription start site region 9366
Tssr9367	1	150518737 to 150518742	5	+	TSS region	transcription start site region 9367
Ska2l-ps	1	150549317 to 150549676	359	+	pseudogene	spindle and kinetochore associated complex subunit 2-like, pseudogene
Gm33818	1	150556237 to 150558703	2466	-	pseudogene	predicted gene, 33818
Hmcn1	1	150562524 to 150993435	430911	-	protein coding gene	hemicentin 1
Gm20631	1	150625266 to 150783499	158233	+	antisense lncRNA gene	predicted gene 20631
Tssr9368	1	150625290 to 150625301	11	+	TSS region	transcription start site region 9368
Tssr14162	1	150653880 to 150653886	6	-	TSS region	transcription start site region 14162
Tssr14163	1	150724744 to 150724750	6	-	TSS region	transcription start site region 14163
Cfq5	1	150730586 to 159479894	8749308		QTL	conditioned fear QTL 5
Tssr244	1	150748616 to 150748618	2	+	TSS region	transcription start site region 244
D1Dcr2	1	150784655 to 150784766	111		DNA segment	DNA segment, Chr 1, Derry C. Roopenian 2
D1Mit346	1	150784679 to 150784828	149		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 346
Tssr14164	1	150797219 to 150797222	3	-	TSS region	transcription start site region 14164
Tssr9369	1	150847353 to 150847354	1	+	TSS region	transcription start site region 9369
D1Mit195	1	150890742 to 150890918	176		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 195
Tssr14165	1	150971256 to 150971268	12	-	TSS region	transcription start site region 14165
Tssr14166	1	150971331 to 150971336	5	-	TSS region	transcription start site region 14166
Tssr14167	1	150993140 to 150993155	15	-	TSS region	transcription start site region 14167
Cpgi846	1	150993196 to 150993793	597		CpG island	CpG island 846
Tssr14168	1	150993422 to 150993449	27	-	TSS region	transcription start site region 14168
Gm29188	1	151001040 to 151004577	3537	+	lincRNA gene	predicted gene 29188
Actre12	1	151007188 to 157361794	6354606		QTL	activity response to ethanol 12
D1Mit289	1	151007188 to 151007338	150		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 289
Gm36297	1	151055923 to 151078116	22193	+	lncRNA gene	predicted gene, 36297
Gm22756	1	151062004 to 151062110	106	-	snRNA gene	predicted gene, 22756
Gm36139	1	151074460 to 151155246	80786	-	lncRNA gene	predicted gene, 36139
Gm36077	1	151080445 to 151083920	3475	-	lncRNA gene	predicted gene, 36077
Gm37671	1	151080450 to 151082545	2095	+	unclassified gene	predicted gene, 37671
Tssr9370	1	151086295 to 151086297	2	+	TSS region	transcription start site region 9370
Tssr9371	1	151089193 to 151089196	3	+	TSS region	transcription start site region 9371