Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:150412524-151143435

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tpr 1 150392838 to 150449935 57097 + protein coding gene translocated promoter region, nuclear basket protein
Tssr9344 1 150414490 to 150414510 20 + TSS region transcription start site region 9344
Tssr9345 1 150414514 to 150414527 13 + TSS region transcription start site region 9345
Tssr9346 1 150417473 to 150417488 15 + TSS region transcription start site region 9346
Tssr9347 1 150421685 to 150421707 22 + TSS region transcription start site region 9347
Tssr9348 1 150421711 to 150421722 11 + TSS region transcription start site region 9348
Tssr9349 1 150423517 to 150423539 22 + TSS region transcription start site region 9349
Tssr9350 1 150423540 to 150423557 17 + TSS region transcription start site region 9350
Tssr9351 1 150423791 to 150423806 15 + TSS region transcription start site region 9351
Tssr9352 1 150423877 to 150423897 20 + TSS region transcription start site region 9352
Tssr9353 1 150423943 to 150423954 11 + TSS region transcription start site region 9353
Tssr9354 1 150424686 to 150424732 46 + TSS region transcription start site region 9354
Tssr9355 1 150426863 to 150426894 31 + TSS region transcription start site region 9355
Tssr9356 1 150429708 to 150429716 8 + TSS region transcription start site region 9356
Tssr9357 1 150430627 to 150430641 14 + TSS region transcription start site region 9357
Tssr9358 1 150431222 to 150431241 19 + TSS region transcription start site region 9358
Tssr9359 1 150432461 to 150432472 11 + TSS region transcription start site region 9359
Tssr9360 1 150433763 to 150433774 11 + TSS region transcription start site region 9360
Tssr9361 1 150439077 to 150439104 27 + TSS region transcription start site region 9361
Tssr9362 1 150448825 to 150448834 9 + TSS region transcription start site region 9362
Tssr9363 1 150448845 to 150448851 6 + TSS region transcription start site region 9363
Tssr9364 1 150449147 to 150449178 31 + TSS region transcription start site region 9364
Prg4 1 150449412 to 150466165 16753 - protein coding gene proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
Tssr14151 1 150454391 to 150454428 37 - TSS region transcription start site region 14151
Tssr14152 1 150454555 to 150454588 33 - TSS region transcription start site region 14152
Tssr14153 1 150454591 to 150454609 18 - TSS region transcription start site region 14153
Tssr14154 1 150455959 to 150455970 11 - TSS region transcription start site region 14154
Tssr14155 1 150455977 to 150455985 8 - TSS region transcription start site region 14155
Tssr14156 1 150456228 to 150456252 24 - TSS region transcription start site region 14156
Tssr14157 1 150465563 to 150465604 41 - TSS region transcription start site region 14157
Tssr14158 1 150466160 to 150466170 10 - TSS region transcription start site region 14158
Tssr14159 1 150466191 to 150466236 45 - TSS region transcription start site region 14159
Gm41967 1 150472533 to 150474472 1939 + lncRNA gene predicted gene, 41967
Tssr9365 1 150496867 to 150496893 26 + TSS region transcription start site region 9365
Tssr14160 1 150502687 to 150502714 27 - TSS region transcription start site region 14160
Tssr14161 1 150503148 to 150503153 5 - TSS region transcription start site region 14161
Tssr9366 1 150517818 to 150517825 7 + TSS region transcription start site region 9366
Tssr9367 1 150518737 to 150518742 5 + TSS region transcription start site region 9367
Ska2l-ps 1 150549317 to 150549676 359 + pseudogene spindle and kinetochore associated complex subunit 2-like, pseudogene
Gm33818 1 150556237 to 150558703 2466 - pseudogene predicted gene, 33818
Hmcn1 1 150562524 to 150993435 430911 - protein coding gene hemicentin 1
Gm20631 1 150625266 to 150783499 158233 + antisense lncRNA gene predicted gene 20631
Tssr9368 1 150625290 to 150625301 11 + TSS region transcription start site region 9368
Tssr14162 1 150653880 to 150653886 6 - TSS region transcription start site region 14162
Tssr14163 1 150724744 to 150724750 6 - TSS region transcription start site region 14163
Cfq5 1 150730586 to 159479894 8749308 QTL conditioned fear QTL 5
Tssr244 1 150748616 to 150748618 2 + TSS region transcription start site region 244
D1Dcr2 1 150784655 to 150784766 111 DNA segment DNA segment, Chr 1, Derry C. Roopenian 2
D1Mit346 1 150784679 to 150784828 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 346
Tssr14164 1 150797219 to 150797222 3 - TSS region transcription start site region 14164
Tssr9369 1 150847353 to 150847354 1 + TSS region transcription start site region 9369
D1Mit195 1 150890742 to 150890918 176 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 195
Tssr14165 1 150971256 to 150971268 12 - TSS region transcription start site region 14165
Tssr14166 1 150971331 to 150971336 5 - TSS region transcription start site region 14166
Tssr14167 1 150993140 to 150993155 15 - TSS region transcription start site region 14167
Cpgi846 1 150993196 to 150993793 597 CpG island CpG island 846
Tssr14168 1 150993422 to 150993449 27 - TSS region transcription start site region 14168
Gm29188 1 151001040 to 151004577 3537 + lincRNA gene predicted gene 29188
D1Mit289 1 151007188 to 151007338 150 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 289
Actre12 1 151007188 to 157361794 6354606 QTL activity response to ethanol 12
Gm36297 1 151055923 to 151078116 22193 + lncRNA gene predicted gene, 36297
Gm22756 1 151062004 to 151062110 106 - snRNA gene predicted gene, 22756
Gm36139 1 151074460 to 151155246 80786 - lncRNA gene predicted gene, 36139
Gm36077 1 151080445 to 151083920 3475 - lncRNA gene predicted gene, 36077
Gm37671 1 151080450 to 151082545 2095 + unclassified gene predicted gene, 37671
Tssr9370 1 151086295 to 151086297 2 + TSS region transcription start site region 9370
Tssr9371 1 151089193 to 151089196 3 + TSS region transcription start site region 9371
Gm19087 1 151107925 to 151108862 937 + pseudogene predicted gene, 19087
Tssr9372 1 151132943 to 151132964 21 + TSS region transcription start site region 9372
Tssr9373 1 151132967 to 151132978 11 + TSS region transcription start site region 9373
Tssr9374 1 151132980 to 151132994 14 + TSS region transcription start site region 9374
Tssr9375 1 151133000 to 151133011 11 + TSS region transcription start site region 9375
Tssr9376 1 151136344 to 151136347 3 + TSS region transcription start site region 9376
Gm8941 1 151136507 to 151137780 1273 + pseudogene predicted gene 8941
C730036E19Rik 1 151138034 to 151142345 4311 + lincRNA gene RIKEN cDNA C730036E19 gene