Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:150173825-150723834

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr9324 1 150175842 to 150175848 6 + TSS region transcription start site region 9324
Tssr9325 1 150179916 to 150179930 14 + TSS region transcription start site region 9325
Tssr9326 1 150180670 to 150180682 12 + TSS region transcription start site region 9326
Tssr14139 1 150197160 to 150197174 14 - TSS region transcription start site region 14139
Tssr14140 1 150197191 to 150197210 19 - TSS region transcription start site region 14140
Tssr14141 1 150197475 to 150197492 17 - TSS region transcription start site region 14141
Tssr14142 1 150197509 to 150197527 18 - TSS region transcription start site region 14142
Tssr14143 1 150203191 to 150203217 26 - TSS region transcription start site region 14143
Tssr14144 1 150218835 to 150218842 7 - TSS region transcription start site region 14144
Rbm3-ps 1 150265535 to 150265999 464 - pseudogene RNA binding motif (RNP1, RRM) protein 3
Tssr14145 1 150266073 to 150266074 1 - TSS region transcription start site region 14145
Gm4322 1 150268926 to 150269261 335 - pseudogene predicted gene 4322
Tssr14146 1 150269464 to 150269465 1 - TSS region transcription start site region 14146
D1Mit200 1 150317922 to 150318120 198 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 200
Splq5 1 150317922 to 188627115 38309193 QTL spleen weight QTL 5
Lgaq3 1 150317922 to 188627115 38309193 QTL late growth adjusted QTL 3
Lgq4 1 150317922 to 188627115 38309193 QTL late growth QTL 4
Splq3 1 150318120 to 34721057 -115597063 QTL spleen weight QTL 3
W10q7 1 150318120 to 34721057 -115597063 QTL weight 10 weeks QTL 7
Kidq2 1 150318120 to 34721057 -115597063 QTL kidney weight QTL 2
Tssr9327 1 150319407 to 150319449 42 + TSS region transcription start site region 9327
Pdc 1 150319417 to 150333906 14489 + protein coding gene phosducin
2310030A07Rik 1 150320681 to 150346771 26090 - antisense lncRNA gene RIKEN cDNA 2310030A07 gene
Gm37764 1 150324538 to 150326687 2149 + unclassified gene predicted gene, 37764
Odr4 1 150361311 to 150393055 31744 - protein coding gene odr4 GPCR localization factor homolog
Tssr14147 1 150362188 to 150362219 31 - TSS region transcription start site region 14147
Tssr243 1 150366964 to 150366965 1 + TSS region transcription start site region 243
Cpgi845 1 150392679 to 150393869 1190 CpG island CpG island 845
Tssr14148 1 150392708 to 150392713 5 - TSS region transcription start site region 14148
Tssr14149 1 150392721 to 150392757 36 - TSS region transcription start site region 14149
Tssr9328 1 150392794 to 150392849 55 + TSS region transcription start site region 9328
Tpr 1 150392838 to 150449935 57097 + protein coding gene translocated promoter region, nuclear basket protein
Tssr9329 1 150392864 to 150392877 13 + TSS region transcription start site region 9329
Tssr14150 1 150393024 to 150393079 55 - TSS region transcription start site region 14150
Tssr9330 1 150393253 to 150393265 12 + TSS region transcription start site region 9330
Tssr9331 1 150393270 to 150393411 141 + TSS region transcription start site region 9331
Tssr9332 1 150393439 to 150393500 61 + TSS region transcription start site region 9332
Tssr9333 1 150393599 to 150393610 11 + TSS region transcription start site region 9333
Tssr9334 1 150395240 to 150395254 14 + TSS region transcription start site region 9334
Tssr9335 1 150395260 to 150395275 15 + TSS region transcription start site region 9335
Tssr9336 1 150403642 to 150403657 15 + TSS region transcription start site region 9336
Tssr9337 1 150403961 to 150403974 13 + TSS region transcription start site region 9337
Tssr9338 1 150407324 to 150407336 12 + TSS region transcription start site region 9338
Tssr9339 1 150407343 to 150407363 20 + TSS region transcription start site region 9339
Tssr9340 1 150407371 to 150407382 11 + TSS region transcription start site region 9340
Tssr9341 1 150407487 to 150407499 12 + TSS region transcription start site region 9341
Tssr9342 1 150407506 to 150407529 23 + TSS region transcription start site region 9342
Tssr9343 1 150407530 to 150407548 18 + TSS region transcription start site region 9343
Tssr9344 1 150414490 to 150414510 20 + TSS region transcription start site region 9344
Tssr9345 1 150414514 to 150414527 13 + TSS region transcription start site region 9345
Tssr9346 1 150417473 to 150417488 15 + TSS region transcription start site region 9346
Tssr9347 1 150421685 to 150421707 22 + TSS region transcription start site region 9347
Tssr9348 1 150421711 to 150421722 11 + TSS region transcription start site region 9348
Tssr9349 1 150423517 to 150423539 22 + TSS region transcription start site region 9349
Tssr9350 1 150423540 to 150423557 17 + TSS region transcription start site region 9350
Tssr9351 1 150423791 to 150423806 15 + TSS region transcription start site region 9351
Tssr9352 1 150423877 to 150423897 20 + TSS region transcription start site region 9352
Tssr9353 1 150423943 to 150423954 11 + TSS region transcription start site region 9353
Tssr9354 1 150424686 to 150424732 46 + TSS region transcription start site region 9354
Tssr9355 1 150426863 to 150426894 31 + TSS region transcription start site region 9355
Tssr9356 1 150429708 to 150429716 8 + TSS region transcription start site region 9356
Tssr9357 1 150430627 to 150430641 14 + TSS region transcription start site region 9357
Tssr9358 1 150431222 to 150431241 19 + TSS region transcription start site region 9358
Tssr9359 1 150432461 to 150432472 11 + TSS region transcription start site region 9359
Tssr9360 1 150433763 to 150433774 11 + TSS region transcription start site region 9360
Tssr9361 1 150439077 to 150439104 27 + TSS region transcription start site region 9361
Tssr9362 1 150448825 to 150448834 9 + TSS region transcription start site region 9362
Tssr9363 1 150448845 to 150448851 6 + TSS region transcription start site region 9363
Tssr9364 1 150449147 to 150449178 31 + TSS region transcription start site region 9364
Prg4 1 150449412 to 150466165 16753 - protein coding gene proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)
Tssr14151 1 150454391 to 150454428 37 - TSS region transcription start site region 14151
Tssr14152 1 150454555 to 150454588 33 - TSS region transcription start site region 14152
Tssr14153 1 150454591 to 150454609 18 - TSS region transcription start site region 14153
Tssr14154 1 150455959 to 150455970 11 - TSS region transcription start site region 14154
Tssr14155 1 150455977 to 150455985 8 - TSS region transcription start site region 14155
Tssr14156 1 150456228 to 150456252 24 - TSS region transcription start site region 14156
Tssr14157 1 150465563 to 150465604 41 - TSS region transcription start site region 14157
Tssr14158 1 150466160 to 150466170 10 - TSS region transcription start site region 14158
Tssr14159 1 150466191 to 150466236 45 - TSS region transcription start site region 14159
Gm41967 1 150472533 to 150474472 1939 + lncRNA gene predicted gene, 41967
Tssr9365 1 150496867 to 150496893 26 + TSS region transcription start site region 9365
Tssr14160 1 150502687 to 150502714 27 - TSS region transcription start site region 14160
Tssr14161 1 150503148 to 150503153 5 - TSS region transcription start site region 14161
Tssr9366 1 150517818 to 150517825 7 + TSS region transcription start site region 9366
Tssr9367 1 150518737 to 150518742 5 + TSS region transcription start site region 9367
Ska2l-ps 1 150549317 to 150549676 359 + pseudogene spindle and kinetochore associated complex subunit 2-like, pseudogene
Gm33818 1 150556237 to 150558703 2466 - pseudogene predicted gene, 33818
Hmcn1 1 150562524 to 150993435 430911 - protein coding gene hemicentin 1
Gm20631 1 150625266 to 150783499 158233 + antisense lncRNA gene predicted gene 20631
Tssr9368 1 150625290 to 150625301 11 + TSS region transcription start site region 9368
Tssr14162 1 150653880 to 150653886 6 - TSS region transcription start site region 14162