Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:150111073-150421074

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm9687 1 150145968 to 150146569 601 + pseudogene predicted gene 9687
Ptgs2os2 1 150159043 to 150164948 5905 - lincRNA gene prostaglandin-endoperoxide synthase 2, opposite strand 2
Tssr14132 1 150164818 to 150164826 8 - TSS region transcription start site region 14132
Tssr14133 1 150164849 to 150164874 25 - TSS region transcription start site region 14133
Tssr14134 1 150164904 to 150164916 12 - TSS region transcription start site region 14134
Tssr14135 1 150164943 to 150164964 21 - TSS region transcription start site region 14135
Tssr14136 1 150164982 to 150164991 9 - TSS region transcription start site region 14136
Tssr14137 1 150165052 to 150165080 28 - TSS region transcription start site region 14137
Tssr9319 1 150165130 to 150165147 17 + TSS region transcription start site region 9319
Tssr9320 1 150165185 to 150165206 21 + TSS region transcription start site region 9320
Tssr9321 1 150165213 to 150165228 15 + TSS region transcription start site region 9321
Tssr14138 1 150165809 to 150165816 7 - TSS region transcription start site region 14138
Tssr9322 1 150167412 to 150167423 11 + TSS region transcription start site region 9322
Tssr9323 1 150167453 to 150167462 9 + TSS region transcription start site region 9323
Tssr9324 1 150175842 to 150175848 6 + TSS region transcription start site region 9324
Tssr9325 1 150179916 to 150179930 14 + TSS region transcription start site region 9325
Tssr9326 1 150180670 to 150180682 12 + TSS region transcription start site region 9326
Tssr14139 1 150197160 to 150197174 14 - TSS region transcription start site region 14139
Tssr14140 1 150197191 to 150197210 19 - TSS region transcription start site region 14140
Tssr14141 1 150197475 to 150197492 17 - TSS region transcription start site region 14141
Tssr14142 1 150197509 to 150197527 18 - TSS region transcription start site region 14142
Tssr14143 1 150203191 to 150203217 26 - TSS region transcription start site region 14143
Tssr14144 1 150218835 to 150218842 7 - TSS region transcription start site region 14144
Rbm3-ps 1 150265535 to 150265999 464 - pseudogene RNA binding motif (RNP1, RRM) protein 3
Tssr14145 1 150266073 to 150266074 1 - TSS region transcription start site region 14145
Gm4322 1 150268926 to 150269261 335 - pseudogene predicted gene 4322
Tssr14146 1 150269464 to 150269465 1 - TSS region transcription start site region 14146
Splq5 1 150317922 to 188627115 38309193 QTL spleen weight QTL 5
D1Mit200 1 150317922 to 150318120 198 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 200
Lgq4 1 150317922 to 188627115 38309193 QTL late growth QTL 4
Lgaq3 1 150317922 to 188627115 38309193 QTL late growth adjusted QTL 3
W10q7 1 150318120 to 34721057 -115597063 QTL weight 10 weeks QTL 7
Kidq2 1 150318120 to 34721057 -115597063 QTL kidney weight QTL 2
Splq3 1 150318120 to 34721057 -115597063 QTL spleen weight QTL 3
Tssr9327 1 150319407 to 150319449 42 + TSS region transcription start site region 9327
Pdc 1 150319417 to 150333906 14489 + protein coding gene phosducin
2310030A07Rik 1 150320681 to 150346771 26090 - antisense lncRNA gene RIKEN cDNA 2310030A07 gene
Gm37764 1 150324538 to 150326687 2149 + unclassified gene predicted gene, 37764
Odr4 1 150361311 to 150393055 31744 - protein coding gene odr4 GPCR localization factor homolog
Tssr14147 1 150362188 to 150362219 31 - TSS region transcription start site region 14147
Tssr243 1 150366964 to 150366965 1 + TSS region transcription start site region 243
Cpgi845 1 150392679 to 150393869 1190 CpG island CpG island 845
Tssr14148 1 150392708 to 150392713 5 - TSS region transcription start site region 14148
Tssr14149 1 150392721 to 150392757 36 - TSS region transcription start site region 14149
Tssr9328 1 150392794 to 150392849 55 + TSS region transcription start site region 9328
Tpr 1 150392838 to 150449935 57097 + protein coding gene translocated promoter region, nuclear basket protein
Tssr9329 1 150392864 to 150392877 13 + TSS region transcription start site region 9329
Tssr14150 1 150393024 to 150393079 55 - TSS region transcription start site region 14150
Tssr9330 1 150393253 to 150393265 12 + TSS region transcription start site region 9330
Tssr9331 1 150393270 to 150393411 141 + TSS region transcription start site region 9331
Tssr9332 1 150393439 to 150393500 61 + TSS region transcription start site region 9332
Tssr9333 1 150393599 to 150393610 11 + TSS region transcription start site region 9333
Tssr9334 1 150395240 to 150395254 14 + TSS region transcription start site region 9334
Tssr9335 1 150395260 to 150395275 15 + TSS region transcription start site region 9335
Tssr9336 1 150403642 to 150403657 15 + TSS region transcription start site region 9336
Tssr9337 1 150403961 to 150403974 13 + TSS region transcription start site region 9337
Tssr9338 1 150407324 to 150407336 12 + TSS region transcription start site region 9338
Tssr9339 1 150407343 to 150407363 20 + TSS region transcription start site region 9339
Tssr9340 1 150407371 to 150407382 11 + TSS region transcription start site region 9340
Tssr9341 1 150407487 to 150407499 12 + TSS region transcription start site region 9341
Tssr9342 1 150407506 to 150407529 23 + TSS region transcription start site region 9342
Tssr9343 1 150407530 to 150407548 18 + TSS region transcription start site region 9343
Tssr9344 1 150414490 to 150414510 20 + TSS region transcription start site region 9344
Tssr9345 1 150414514 to 150414527 13 + TSS region transcription start site region 9345
Tssr9346 1 150417473 to 150417488 15 + TSS region transcription start site region 9346