Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:149689037-150519082

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223 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23535 1 149707377 to 149707482 105 - snRNA gene predicted gene, 23535
n-R5s218 1 149734750 to 149734858 108 - rRNA gene nuclear encoded rRNA 5S 218
D1Mit369 1 149744092 to 149744232 140 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 369
Pla2g4a 1 149829618 to 149961290 131672 - protein coding gene phospholipase A2, group IVA (cytosolic, calcium-dependent)
Tssr14118 1 149831210 to 149831218 8 - TSS region transcription start site region 14118
Tssr14119 1 149840971 to 149840976 5 - TSS region transcription start site region 14119
n-R5s219 1 149841530 to 149841661 131 + rRNA gene nuclear encoded rRNA 5S 219
Cpgi843 1 149857384 to 149857562 178 CpG island CpG island 843
Tssr14120 1 149922339 to 149922373 34 - TSS region transcription start site region 14120
Tssr14121 1 149946361 to 149946364 3 - TSS region transcription start site region 14121
Tssr14122 1 149960720 to 149960743 23 - TSS region transcription start site region 14122
Tssr14123 1 149961230 to 149961300 70 - TSS region transcription start site region 14123
Tssr14124 1 149961671 to 149961697 26 - TSS region transcription start site region 14124
Tssr14125 1 150015287 to 150015304 17 - TSS region transcription start site region 14125
Gm19136 1 150022189 to 150024232 2043 - pseudogene predicted gene, 19136
Gm44329 1 150063157 to 150063268 111 - miRNA gene predicted gene, 44329
Tssr14126 1 150069959 to 150069960 1 - TSS region transcription start site region 14126
Ptgs2os 1 150074873 to 150099874 25001 - lncRNA gene prostaglandin-endoperoxide synthase 2, opposite strand
Tssr14127 1 150099540 to 150099555 15 - TSS region transcription start site region 14127
Tssr14128 1 150099571 to 150099610 39 - TSS region transcription start site region 14128
Cpgi844 1 150099636 to 150100321 685 CpG island CpG island 844
Tssr14129 1 150099668 to 150099685 17 - TSS region transcription start site region 14129
Tssr9221 1 150099736 to 150099757 21 + TSS region transcription start site region 9221
Ptgs2 1 150100031 to 150108227 8196 + protein coding gene prostaglandin-endoperoxide synthase 2
Tssr9222 1 150100093 to 150100106 13 + TSS region transcription start site region 9222
Tssr9223 1 150100946 to 150100949 3 + TSS region transcription start site region 9223
Tssr9224 1 150100964 to 150101057 93 + TSS region transcription start site region 9224
Tssr9225 1 150101171 to 150101182 11 + TSS region transcription start site region 9225
Tssr9226 1 150101184 to 150101195 11 + TSS region transcription start site region 9226
Tssr9227 1 150101204 to 150101273 69 + TSS region transcription start site region 9227
Tssr14130 1 150101242 to 150101262 20 - TSS region transcription start site region 14130
Tssr14131 1 150101265 to 150101318 53 - TSS region transcription start site region 14131
Tssr9228 1 150101295 to 150101313 18 + TSS region transcription start site region 9228
Tssr9229 1 150101317 to 150101326 9 + TSS region transcription start site region 9229
Tssr9230 1 150101977 to 150102113 136 + TSS region transcription start site region 9230
Tssr9231 1 150102129 to 150102146 17 + TSS region transcription start site region 9231
Tssr9232 1 150102169 to 150102189 20 + TSS region transcription start site region 9232
Tssr9233 1 150102642 to 150102645 3 + TSS region transcription start site region 9233
Tssr9234 1 150102646 to 150102674 28 + TSS region transcription start site region 9234
Tssr9235 1 150102686 to 150102705 19 + TSS region transcription start site region 9235
Tssr9236 1 150102723 to 150102730 7 + TSS region transcription start site region 9236
Tssr9237 1 150102742 to 150102762 20 + TSS region transcription start site region 9237
Tssr9238 1 150102771 to 150102793 22 + TSS region transcription start site region 9238
Tssr242 1 150102800 to 150102805 5 + TSS region transcription start site region 242
Tssr9239 1 150102812 to 150102827 15 + TSS region transcription start site region 9239
Tssr9240 1 150102834 to 150102841 7 + TSS region transcription start site region 9240
Tssr9241 1 150102860 to 150102871 11 + TSS region transcription start site region 9241
Tssr9242 1 150102880 to 150102887 7 + TSS region transcription start site region 9242
Tssr9243 1 150103004 to 150103014 10 + TSS region transcription start site region 9243
Tssr9244 1 150103049 to 150103065 16 + TSS region transcription start site region 9244
Tssr9245 1 150103069 to 150103101 32 + TSS region transcription start site region 9245
Tssr9246 1 150103106 to 150103120 14 + TSS region transcription start site region 9246
Tssr9247 1 150103245 to 150103255 10 + TSS region transcription start site region 9247
Tssr9248 1 150103665 to 150103688 23 + TSS region transcription start site region 9248
Tssr9249 1 150103692 to 150103702 10 + TSS region transcription start site region 9249
Tssr9250 1 150103860 to 150103903 43 + TSS region transcription start site region 9250
Tssr9251 1 150103906 to 150103955 49 + TSS region transcription start site region 9251
Tssr9252 1 150103961 to 150103990 29 + TSS region transcription start site region 9252
Tssr9253 1 150103991 to 150104015 24 + TSS region transcription start site region 9253
Tssr9254 1 150104018 to 150104031 13 + TSS region transcription start site region 9254
Tssr9255 1 150104037 to 150104082 45 + TSS region transcription start site region 9255
Tssr9256 1 150104277 to 150104287 10 + TSS region transcription start site region 9256
Tssr9257 1 150104301 to 150104321 20 + TSS region transcription start site region 9257
Tssr9258 1 150104324 to 150104337 13 + TSS region transcription start site region 9258
Tssr9259 1 150104349 to 150104394 45 + TSS region transcription start site region 9259
Tssr9260 1 150104404 to 150104446 42 + TSS region transcription start site region 9260
Tssr9261 1 150104459 to 150104465 6 + TSS region transcription start site region 9261
Tssr9262 1 150104467 to 150104486 19 + TSS region transcription start site region 9262
Tssr9263 1 150104489 to 150104498 9 + TSS region transcription start site region 9263
Tssr9264 1 150104534 to 150104547 13 + TSS region transcription start site region 9264
Tssr9265 1 150104565 to 150104574 9 + TSS region transcription start site region 9265
Tssr9266 1 150104654 to 150104663 9 + TSS region transcription start site region 9266
Tssr9267 1 150104945 to 150104998 53 + TSS region transcription start site region 9267
Tssr9268 1 150105001 to 150105068 67 + TSS region transcription start site region 9268
Tssr9269 1 150105384 to 150105405 21 + TSS region transcription start site region 9269
Tssr9270 1 150105424 to 150105436 12 + TSS region transcription start site region 9270
Tssr9271 1 150105448 to 150105459 11 + TSS region transcription start site region 9271
Tssr9272 1 150105478 to 150105490 12 + TSS region transcription start site region 9272
Tssr9273 1 150105530 to 150105534 4 + TSS region transcription start site region 9273
Tssr9274 1 150105548 to 150105554 6 + TSS region transcription start site region 9274
Tssr9275 1 150105575 to 150105586 11 + TSS region transcription start site region 9275
Tssr9276 1 150105590 to 150105600 10 + TSS region transcription start site region 9276
Tssr9277 1 150105640 to 150105656 16 + TSS region transcription start site region 9277
Tssr9278 1 150105661 to 150105677 16 + TSS region transcription start site region 9278
Tssr9279 1 150105682 to 150105695 13 + TSS region transcription start site region 9279
Tssr9280 1 150105699 to 150105795 96 + TSS region transcription start site region 9280
Tssr9281 1 150105805 to 150105815 10 + TSS region transcription start site region 9281
Tssr9282 1 150105840 to 150105849 9 + TSS region transcription start site region 9282
Tssr9283 1 150105854 to 150105864 10 + TSS region transcription start site region 9283
Tssr9284 1 150105869 to 150105876 7 + TSS region transcription start site region 9284
Tssr9285 1 150105879 to 150105890 11 + TSS region transcription start site region 9285
Tssr9286 1 150105963 to 150105969 6 + TSS region transcription start site region 9286
Tssr9287 1 150106476 to 150106485 9 + TSS region transcription start site region 9287
Tssr9288 1 150106592 to 150106599 7 + TSS region transcription start site region 9288
Tssr9289 1 150106609 to 150106616 7 + TSS region transcription start site region 9289
Tssr9290 1 150106765 to 150106770 5 + TSS region transcription start site region 9290
Tssr9291 1 150106811 to 150106818 7 + TSS region transcription start site region 9291
Tssr9292 1 150106930 to 150106946 16 + TSS region transcription start site region 9292
Tssr9293 1 150106959 to 150106962 3 + TSS region transcription start site region 9293
Tssr9294 1 150106979 to 150106985 6 + TSS region transcription start site region 9294
Tssr9295 1 150106995 to 150107012 17 + TSS region transcription start site region 9295
Tssr9296 1 150107017 to 150107024 7 + TSS region transcription start site region 9296
Tssr9297 1 150107026 to 150107037 11 + TSS region transcription start site region 9297
Tssr9298 1 150107052 to 150107063 11 + TSS region transcription start site region 9298
Tssr9299 1 150107074 to 150107081 7 + TSS region transcription start site region 9299
Tssr9300 1 150107091 to 150107100 9 + TSS region transcription start site region 9300
Tssr9301 1 150107225 to 150107233 8 + TSS region transcription start site region 9301
Tssr9302 1 150107255 to 150107257 2 + TSS region transcription start site region 9302
Tssr9303 1 150107317 to 150107333 16 + TSS region transcription start site region 9303
Tssr9304 1 150107341 to 150107353 12 + TSS region transcription start site region 9304
Tssr9305 1 150107359 to 150107362 3 + TSS region transcription start site region 9305
Tssr9306 1 150107371 to 150107374 3 + TSS region transcription start site region 9306
Tssr9307 1 150107375 to 150107400 25 + TSS region transcription start site region 9307
Tssr9308 1 150107408 to 150107417 9 + TSS region transcription start site region 9308
Tssr9309 1 150107422 to 150107439 17 + TSS region transcription start site region 9309
Tssr9310 1 150107453 to 150107464 11 + TSS region transcription start site region 9310
Tssr9311 1 150107465 to 150107487 22 + TSS region transcription start site region 9311
Tssr9312 1 150107490 to 150107505 15 + TSS region transcription start site region 9312
Tssr9313 1 150107510 to 150107513 3 + TSS region transcription start site region 9313
Tssr9314 1 150107521 to 150107532 11 + TSS region transcription start site region 9314
Tssr9315 1 150107615 to 150107624 9 + TSS region transcription start site region 9315
Tssr9316 1 150107798 to 150107809 11 + TSS region transcription start site region 9316
Tssr9317 1 150108075 to 150108095 20 + TSS region transcription start site region 9317
Tssr9318 1 150108804 to 150108823 19 + TSS region transcription start site region 9318
Gm9687 1 150145968 to 150146569 601 + pseudogene predicted gene 9687
Ptgs2os2 1 150159043 to 150164948 5905 - lincRNA gene prostaglandin-endoperoxide synthase 2, opposite strand 2
Tssr14132 1 150164818 to 150164826 8 - TSS region transcription start site region 14132
Tssr14133 1 150164849 to 150164874 25 - TSS region transcription start site region 14133
Tssr14134 1 150164904 to 150164916 12 - TSS region transcription start site region 14134
Tssr14135 1 150164943 to 150164964 21 - TSS region transcription start site region 14135
Tssr14136 1 150164982 to 150164991 9 - TSS region transcription start site region 14136
Tssr14137 1 150165052 to 150165080 28 - TSS region transcription start site region 14137
Tssr9319 1 150165130 to 150165147 17 + TSS region transcription start site region 9319
Tssr9320 1 150165185 to 150165206 21 + TSS region transcription start site region 9320
Tssr9321 1 150165213 to 150165228 15 + TSS region transcription start site region 9321
Tssr14138 1 150165809 to 150165816 7 - TSS region transcription start site region 14138
Tssr9322 1 150167412 to 150167423 11 + TSS region transcription start site region 9322
Tssr9323 1 150167453 to 150167462 9 + TSS region transcription start site region 9323
Tssr9324 1 150175842 to 150175848 6 + TSS region transcription start site region 9324
Tssr9325 1 150179916 to 150179930 14 + TSS region transcription start site region 9325
Tssr9326 1 150180670 to 150180682 12 + TSS region transcription start site region 9326
Tssr14139 1 150197160 to 150197174 14 - TSS region transcription start site region 14139
Tssr14140 1 150197191 to 150197210 19 - TSS region transcription start site region 14140
Tssr14141 1 150197475 to 150197492 17 - TSS region transcription start site region 14141
Tssr14142 1 150197509 to 150197527 18 - TSS region transcription start site region 14142
Tssr14143 1 150203191 to 150203217 26 - TSS region transcription start site region 14143
Tssr14144 1 150218835 to 150218842 7 - TSS region transcription start site region 14144
Rbm3-ps 1 150265535 to 150265999 464 - pseudogene RNA binding motif (RNP1, RRM) protein 3
Tssr14145 1 150266073 to 150266074 1 - TSS region transcription start site region 14145
Gm4322 1 150268926 to 150269261 335 - pseudogene predicted gene 4322
Tssr14146 1 150269464 to 150269465 1 - TSS region transcription start site region 14146
Lgaq3 1 150317922 to 188627115 38309193 QTL late growth adjusted QTL 3
D1Mit200 1 150317922 to 150318120 198 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 200
Splq5 1 150317922 to 188627115 38309193 QTL spleen weight QTL 5
Lgq4 1 150317922 to 188627115 38309193 QTL late growth QTL 4
Splq3 1 150318120 to 34721057 -115597063 QTL spleen weight QTL 3
W10q7 1 150318120 to 34721057 -115597063 QTL weight 10 weeks QTL 7
Kidq2 1 150318120 to 34721057 -115597063 QTL kidney weight QTL 2
Tssr9327 1 150319407 to 150319449 42 + TSS region transcription start site region 9327
Pdc 1 150319417 to 150333906 14489 + protein coding gene phosducin
2310030A07Rik 1 150320681 to 150346771 26090 - antisense lncRNA gene RIKEN cDNA 2310030A07 gene
Gm37764 1 150324538 to 150326687 2149 + unclassified gene predicted gene, 37764
Odr4 1 150361311 to 150393055 31744 - protein coding gene odr4 GPCR localization factor homolog
Tssr14147 1 150362188 to 150362219 31 - TSS region transcription start site region 14147
Tssr243 1 150366964 to 150366965 1 + TSS region transcription start site region 243
Cpgi845 1 150392679 to 150393869 1190 CpG island CpG island 845
Tssr14148 1 150392708 to 150392713 5 - TSS region transcription start site region 14148
Tssr14149 1 150392721 to 150392757 36 - TSS region transcription start site region 14149
Tssr9328 1 150392794 to 150392849 55 + TSS region transcription start site region 9328
Tpr 1 150392838 to 150449935 57097 + protein coding gene translocated promoter region, nuclear basket protein
Tssr9329 1 150392864 to 150392877 13 + TSS region transcription start site region 9329
Tssr14150 1 150393024 to 150393079 55 - TSS region transcription start site region 14150
Tssr9330 1 150393253 to 150393265 12 + TSS region transcription start site region 9330
Tssr9331 1 150393270 to 150393411 141 + TSS region transcription start site region 9331
Tssr9332 1 150393439 to 150393500 61 + TSS region transcription start site region 9332
Tssr9333 1 150393599 to 150393610 11 + TSS region transcription start site region 9333
Tssr9334 1 150395240 to 150395254 14 + TSS region transcription start site region 9334
Tssr9335 1 150395260 to 150395275 15 + TSS region transcription start site region 9335
Tssr9336 1 150403642 to 150403657 15 + TSS region transcription start site region 9336
Tssr9337 1 150403961 to 150403974 13 + TSS region transcription start site region 9337
Tssr9338 1 150407324 to 150407336 12 + TSS region transcription start site region 9338
Tssr9339 1 150407343 to 150407363 20 + TSS region transcription start site region 9339
Tssr9340 1 150407371 to 150407382 11 + TSS region transcription start site region 9340
Tssr9341 1 150407487 to 150407499 12 + TSS region transcription start site region 9341
Tssr9342 1 150407506 to 150407529 23 + TSS region transcription start site region 9342
Tssr9343 1 150407530 to 150407548 18 + TSS region transcription start site region 9343
Tssr9344 1 150414490 to 150414510 20 + TSS region transcription start site region 9344
Tssr9345 1 150414514 to 150414527 13 + TSS region transcription start site region 9345
Tssr9346 1 150417473 to 150417488 15 + TSS region transcription start site region 9346
Tssr9347 1 150421685 to 150421707 22 + TSS region transcription start site region 9347
Tssr9348 1 150421711 to 150421722 11 + TSS region transcription start site region 9348
Tssr9349 1 150423517 to 150423539 22 + TSS region transcription start site region 9349
Tssr9350 1 150423540 to 150423557 17 + TSS region transcription start site region 9350
Tssr9351 1 150423791 to 150423806 15 + TSS region transcription start site region 9351
Tssr9352 1 150423877 to 150423897 20 + TSS region transcription start site region 9352
Tssr9353 1 150423943 to 150423954 11 + TSS region transcription start site region 9353
Tssr9354 1 150424686 to 150424732 46 + TSS region transcription start site region 9354
Tssr9355 1 150426863 to 150426894 31 + TSS region transcription start site region 9355
Tssr9356 1 150429708 to 150429716 8 + TSS region transcription start site region 9356
Tssr9357 1 150430627 to 150430641 14 + TSS region transcription start site region 9357