MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:14814040-15224159

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14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smt3h2-ps4	1	14839869 to 14840156	287	-	pseudogene	SMT3 suppressor of mif two 3 homolog 2, pseudogene 4 (S. cerevisiae)
Tssr5975	1	14864998 to 14865008	10	+	TSS region	transcription start site region 5975
Rpl5-ps1	1	14865072 to 14865965	893	+	pseudogene	ribosomal protein L5, pseudogene 1
Tssr5976	1	14869730 to 14869733	3	+	TSS region	transcription start site region 5976
Gm33500	1	14869758 to 14870038	280	+	pseudogene	predicted gene, 33500
Trpa1	1	14872648 to 14918862	46214	-	protein coding gene	transient receptor potential cation channel, subfamily A, member 1
Cpgi48	1	14918589 to 14918922	333		CpG island	CpG island 48
Tssr11030	1	14931246 to 14931252	6	-	TSS region	transcription start site region 11030
Gm26345	1	15019040 to 15019159	119	-	snoRNA gene	predicted gene, 26345
Tssr5977	1	15067003 to 15067042	39	+	TSS region	transcription start site region 5977
Gm5048	1	15067032 to 15067558	526	+	pseudogene	predicted gene 5048
D1Mit297	1	15130066 to 15130262	196		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 297
Tssr5978	1	15201847 to 15201850	3	+	TSS region	transcription start site region 5978
Gm19917	1	15201959 to 15205406	3447	+	pseudogene	predicted gene, 19917