Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:147200345-150101134

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Radpf2 1 147249520 to 183092234 35842714 QTL radiation pulmonary fibrosis 2
D1Mit102 1 147249520 to 147249632 112 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 102
Hbnr4 1 147249520 to 189251027 42001507 QTL Heligmosomoides bakeri nematode resistance 4
Nidd3k 1 147249520 to 169211344 21961824 QTL Nidd3 on KK-A
Pas8 1 147249520 to 158405702 11156182 QTL pulmonary adenoma susceptibility 8
Scgq2 1 147249520 to 171804689 24555169 QTL spontaneous crescentic glomerulonephritis QTL 2
D1Dcr11 1 147249535 to 147249631 96 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 11
Lrdg1 1 147249632 to 73716016 -73533616 QTL light induced retinal degeneration 1
Nidd4k 1 147249632 to 82314261 -64935371 QTL Nidd4 on KK-A
Gm9931 1 147280758 to 147281942 1184 - unclassified gene predicted gene 9931
Gm17867 1 147503886 to 147504919 1033 - pseudogene predicted gene, 17867
Gm38284 1 147515726 to 147520264 4538 + unclassified gene predicted gene, 38284
Gm29516 1 147990085 to 147990552 467 + pseudogene predicted gene 29516
Gm29515 1 148234517 to 148248378 13861 - lincRNA gene predicted gene 29515
Gm22966 1 148326980 to 148327108 128 - snoRNA gene predicted gene, 22966
Gm19891 1 148498508 to 148498810 302 + pseudogene predicted gene, 19891
Gm18505 1 148650345 to 148651134 789 - pseudogene predicted gene, 18505
Gm41966 1 148712771 to 148716753 3982 + lncRNA gene predicted gene, 41966
D1Mit196 1 148792041 to 148792190 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 196
D1Mit449 1 148812277 to 148812425 148 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 449
D1Mit265 1 148839734 to 148839837 103 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 265
Gcsfis 1 148839837 to 74477076 -74362761 QTL G-CSF induced splenomegaly
Tssr240 1 148841700 to 148841701 1 + TSS region transcription start site region 240
Gm4034 1 148937897 to 148938376 479 - pseudogene predicted gene 4034
Gm29022 1 148941097 to 148941321 224 - pseudogene predicted gene 29022
Gm5703 1 148975517 to 148979380 3863 + pseudogene predicted gene 5703
Tssr241 1 148978895 to 148978896 1 + TSS region transcription start site region 241
Gm15443 1 149025228 to 149026047 819 - pseudogene predicted gene 15443
Gm18751 1 149037619 to 149039596 1977 + pseudogene predicted gene, 18751
Gm29020 1 149106115 to 149127320 21205 + lincRNA gene predicted gene 29020
Gm18701 1 149173417 to 149174515 1098 + pseudogene predicted gene, 18701
D1Mit288 1 149342472 to 149342620 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 288
Gm37630 1 149408490 to 149409945 1455 - unclassified gene predicted gene, 37630
Gm38189 1 149410723 to 149412179 1456 - unclassified gene predicted gene, 38189
Gm29398 1 149413260 to 149449951 36691 - lincRNA gene predicted gene 29398
Gm37096 1 149431910 to 149433967 2057 - unclassified gene predicted gene, 37096
Gm37775 1 149435015 to 149437327 2312 - unclassified gene predicted gene, 37775
Tssr14116 1 149449942 to 149449956 14 - TSS region transcription start site region 14116
Tssr14117 1 149449963 to 149449974 11 - TSS region transcription start site region 14117
Gm23535 1 149707377 to 149707482 105 - snRNA gene predicted gene, 23535
n-R5s218 1 149734750 to 149734858 108 - rRNA gene nuclear encoded rRNA 5S 218
D1Mit369 1 149744092 to 149744232 140 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 369
Pla2g4a 1 149829618 to 149961290 131672 - protein coding gene phospholipase A2, group IVA (cytosolic, calcium-dependent)
Tssr14118 1 149831210 to 149831218 8 - TSS region transcription start site region 14118
Tssr14119 1 149840971 to 149840976 5 - TSS region transcription start site region 14119
n-R5s219 1 149841530 to 149841661 131 + rRNA gene nuclear encoded rRNA 5S 219
Cpgi843 1 149857384 to 149857562 178 CpG island CpG island 843
Tssr14120 1 149922339 to 149922373 34 - TSS region transcription start site region 14120
Tssr14121 1 149946361 to 149946364 3 - TSS region transcription start site region 14121
Tssr14122 1 149960720 to 149960743 23 - TSS region transcription start site region 14122
Tssr14123 1 149961230 to 149961300 70 - TSS region transcription start site region 14123
Tssr14124 1 149961671 to 149961697 26 - TSS region transcription start site region 14124
Tssr14125 1 150015287 to 150015304 17 - TSS region transcription start site region 14125
Gm19136 1 150022189 to 150024232 2043 - pseudogene predicted gene, 19136
Gm44329 1 150063157 to 150063268 111 - miRNA gene predicted gene, 44329
Tssr14126 1 150069959 to 150069960 1 - TSS region transcription start site region 14126
Ptgs2os 1 150074873 to 150099874 25001 - lncRNA gene prostaglandin-endoperoxide synthase 2, opposite strand
Tssr14127 1 150099540 to 150099555 15 - TSS region transcription start site region 14127
Tssr14128 1 150099571 to 150099610 39 - TSS region transcription start site region 14128
Cpgi844 1 150099636 to 150100321 685 CpG island CpG island 844
Tssr14129 1 150099668 to 150099685 17 - TSS region transcription start site region 14129
Tssr9221 1 150099736 to 150099757 21 + TSS region transcription start site region 9221
Ptgs2 1 150100031 to 150108227 8196 + protein coding gene prostaglandin-endoperoxide synthase 2
Tssr9222 1 150100093 to 150100106 13 + TSS region transcription start site region 9222
Tssr9223 1 150100946 to 150100949 3 + TSS region transcription start site region 9223
Tssr9224 1 150100964 to 150101057 93 + TSS region transcription start site region 9224