Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:146249831-147401696

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Emo5 1 143999338 to 146902474 2903136 QTL emotionality 5
Emo3 1 146255120 to 146255255 135 QTL emotionality 3
D1Mit264 1 146255120 to 146255255 135 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 264
Gm41965 1 146308481 to 146313226 4745 - lncRNA gene predicted gene, 41965
Tssr9213 1 146323197 to 146323206 9 + TSS region transcription start site region 9213
Gm5263 1 146420434 to 146420974 540 + pseudogene predicted gene 5263
Gm29514 1 146422844 to 146495041 72197 - antisense lncRNA gene predicted gene 29514
Gm38187 1 146477647 to 146482355 4708 - unclassified gene predicted gene, 38187
Tssr9214 1 146495599 to 146495606 7 + TSS region transcription start site region 9214
Tssr9215 1 146495621 to 146495636 15 + TSS region transcription start site region 9215
Tssr9216 1 146495644 to 146495679 35 + TSS region transcription start site region 9216
Brinp3 1 146495666 to 146902474 406808 + protein coding gene bone morphogenetic protein/retinoic acid inducible neural specific 3
Tssr9217 1 146495687 to 146495693 6 + TSS region transcription start site region 9217
Tssr9218 1 146495698 to 146495707 9 + TSS region transcription start site region 9218
Cpgi840 1 146497365 to 146497581 216 CpG island CpG island 840
Tssr9219 1 146497671 to 146497707 36 + TSS region transcription start site region 9219
Cpgi841 1 146497866 to 146498139 273 CpG island CpG island 841
Cpgi842 1 146724897 to 146725066 169 CpG island CpG island 842
Gm15583 1 146725581 to 146729090 3509 + pseudogene predicted gene 15583
Tssr9220 1 146774186 to 146774196 10 + TSS region transcription start site region 9220
A230059L01Rik 1 146802965 to 146807340 4375 - unclassified gene RIKEN cDNA A230059L01 gene
Edvq2 1 146807769 to 146807769 0 QTL endothelium dependent vasorelaxation QTL 2
Gm15584 1 146809831 to 146841696 31865 - antisense lncRNA gene predicted gene 15584
D1Mit194 1 147032461 to 147032610 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 194
Ap1q 1 147032461 to 167758653 20726192 QTL alcohol preference 1 QTL
Gm37749 1 147089037 to 147090935 1898 + unclassified gene predicted gene, 37749
Scgq2 1 147249520 to 171804689 24555169 QTL spontaneous crescentic glomerulonephritis QTL 2
Pas8 1 147249520 to 158405702 11156182 QTL pulmonary adenoma susceptibility 8
Radpf2 1 147249520 to 183092234 35842714 QTL radiation pulmonary fibrosis 2
Hbnr4 1 147249520 to 189251027 42001507 QTL Heligmosomoides bakeri nematode resistance 4
Nidd3k 1 147249520 to 169211344 21961824 QTL Nidd3 on KK-A
D1Mit102 1 147249520 to 147249632 112 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 102
D1Dcr11 1 147249535 to 147249631 96 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 11
Nidd4k 1 147249632 to 82314261 -64935371 QTL Nidd4 on KK-A
Lrdg1 1 147249632 to 73716016 -73533616 QTL light induced retinal degeneration 1
Gm9931 1 147280758 to 147281942 1184 - unclassified gene predicted gene 9931