Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:145850640-154360656

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751 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Emo5 1 143999338 to 146902474 2903136 QTL emotionality 5
D1Mit198 1 145973493 to 145973607 114 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 198
Gm46245 1 146198996 to 146202678 3682 - pseudogene predicted gene, 46245
D1Mit264 1 146255120 to 146255255 135 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 264
Emo3 1 146255120 to 146255255 135 QTL emotionality 3
Gm41965 1 146308481 to 146313226 4745 - lncRNA gene predicted gene, 41965
Tssr9213 1 146323197 to 146323206 9 + TSS region transcription start site region 9213
Gm5263 1 146420434 to 146420974 540 + pseudogene predicted gene 5263
Gm29514 1 146422844 to 146495041 72197 - antisense lncRNA gene predicted gene 29514
Gm38187 1 146477647 to 146482355 4708 - unclassified gene predicted gene, 38187
Tssr9214 1 146495599 to 146495606 7 + TSS region transcription start site region 9214
Tssr9215 1 146495621 to 146495636 15 + TSS region transcription start site region 9215
Tssr9216 1 146495644 to 146495679 35 + TSS region transcription start site region 9216
Brinp3 1 146495666 to 146902474 406808 + protein coding gene bone morphogenetic protein/retinoic acid inducible neural specific 3
Tssr9217 1 146495687 to 146495693 6 + TSS region transcription start site region 9217
Tssr9218 1 146495698 to 146495707 9 + TSS region transcription start site region 9218
Cpgi840 1 146497365 to 146497581 216 CpG island CpG island 840
Tssr9219 1 146497671 to 146497707 36 + TSS region transcription start site region 9219
Cpgi841 1 146497866 to 146498139 273 CpG island CpG island 841
Cpgi842 1 146724897 to 146725066 169 CpG island CpG island 842
Gm15583 1 146725581 to 146729090 3509 + pseudogene predicted gene 15583
Tssr9220 1 146774186 to 146774196 10 + TSS region transcription start site region 9220
A230059L01Rik 1 146802965 to 146807340 4375 - unclassified gene RIKEN cDNA A230059L01 gene
Edvq2 1 146807769 to 146807769 0 QTL endothelium dependent vasorelaxation QTL 2
Gm15584 1 146809831 to 146841696 31865 - antisense lncRNA gene predicted gene 15584
Ap1q 1 147032461 to 167758653 20726192 QTL alcohol preference 1 QTL
D1Mit194 1 147032461 to 147032610 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 194
Gm37749 1 147089037 to 147090935 1898 + unclassified gene predicted gene, 37749
Radpf2 1 147249520 to 183092234 35842714 QTL radiation pulmonary fibrosis 2
Pas8 1 147249520 to 158405702 11156182 QTL pulmonary adenoma susceptibility 8
D1Mit102 1 147249520 to 147249632 112 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 102
Nidd3k 1 147249520 to 169211344 21961824 QTL Nidd3 on KK-A
Scgq2 1 147249520 to 171804689 24555169 QTL spontaneous crescentic glomerulonephritis QTL 2
Hbnr4 1 147249520 to 189251027 42001507 QTL Heligmosomoides bakeri nematode resistance 4
D1Dcr11 1 147249535 to 147249631 96 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 11
Lrdg1 1 147249632 to 73716016 -73533616 QTL light induced retinal degeneration 1
Nidd4k 1 147249632 to 82314261 -64935371 QTL Nidd4 on KK-A
Gm9931 1 147280758 to 147281942 1184 - unclassified gene predicted gene 9931
Gm17867 1 147503886 to 147504919 1033 - pseudogene predicted gene, 17867
Gm38284 1 147515726 to 147520264 4538 + unclassified gene predicted gene, 38284
Gm29516 1 147990085 to 147990552 467 + pseudogene predicted gene 29516
Gm29515 1 148234517 to 148248378 13861 - lincRNA gene predicted gene 29515
Gm22966 1 148326980 to 148327108 128 - snoRNA gene predicted gene, 22966
Gm19891 1 148498508 to 148498810 302 + pseudogene predicted gene, 19891
Gm18505 1 148650345 to 148651134 789 - pseudogene predicted gene, 18505
Gm41966 1 148712771 to 148716753 3982 + lncRNA gene predicted gene, 41966
D1Mit196 1 148792041 to 148792190 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 196
D1Mit449 1 148812277 to 148812425 148 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 449
D1Mit265 1 148839734 to 148839837 103 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 265
Gcsfis 1 148839837 to 74477076 -74362761 QTL G-CSF induced splenomegaly
Tssr240 1 148841700 to 148841701 1 + TSS region transcription start site region 240
Gm4034 1 148937897 to 148938376 479 - pseudogene predicted gene 4034
Gm29022 1 148941097 to 148941321 224 - pseudogene predicted gene 29022
Gm5703 1 148975517 to 148979380 3863 + pseudogene predicted gene 5703
Tssr241 1 148978895 to 148978896 1 + TSS region transcription start site region 241
Gm15443 1 149025228 to 149026047 819 - pseudogene predicted gene 15443
Gm18751 1 149037619 to 149039596 1977 + pseudogene predicted gene, 18751
Gm29020 1 149106115 to 149127320 21205 + lincRNA gene predicted gene 29020
Gm18701 1 149173417 to 149174515 1098 + pseudogene predicted gene, 18701
D1Mit288 1 149342472 to 149342620 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 288
Gm37630 1 149408490 to 149409945 1455 - unclassified gene predicted gene, 37630
Gm38189 1 149410723 to 149412179 1456 - unclassified gene predicted gene, 38189
Gm29398 1 149413260 to 149449951 36691 - lincRNA gene predicted gene 29398
Gm37096 1 149431910 to 149433967 2057 - unclassified gene predicted gene, 37096
Gm37775 1 149435015 to 149437327 2312 - unclassified gene predicted gene, 37775
Tssr14116 1 149449942 to 149449956 14 - TSS region transcription start site region 14116
Tssr14117 1 149449963 to 149449974 11 - TSS region transcription start site region 14117
Gm23535 1 149707377 to 149707482 105 - snRNA gene predicted gene, 23535
n-R5s218 1 149734750 to 149734858 108 - rRNA gene nuclear encoded rRNA 5S 218
D1Mit369 1 149744092 to 149744232 140 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 369
Pla2g4a 1 149829618 to 149961290 131672 - protein coding gene phospholipase A2, group IVA (cytosolic, calcium-dependent)
Tssr14118 1 149831210 to 149831218 8 - TSS region transcription start site region 14118
Tssr14119 1 149840971 to 149840976 5 - TSS region transcription start site region 14119
n-R5s219 1 149841530 to 149841661 131 + rRNA gene nuclear encoded rRNA 5S 219
Cpgi843 1 149857384 to 149857562 178 CpG island CpG island 843
Tssr14120 1 149922339 to 149922373 34 - TSS region transcription start site region 14120
Tssr14121 1 149946361 to 149946364 3 - TSS region transcription start site region 14121
Tssr14122 1 149960720 to 149960743 23 - TSS region transcription start site region 14122
Tssr14123 1 149961230 to 149961300 70 - TSS region transcription start site region 14123
Tssr14124 1 149961671 to 149961697 26 - TSS region transcription start site region 14124
Tssr14125 1 150015287 to 150015304 17 - TSS region transcription start site region 14125
Gm19136 1 150022189 to 150024232 2043 - pseudogene predicted gene, 19136
Gm44329 1 150063157 to 150063268 111 - miRNA gene predicted gene, 44329
Tssr14126 1 150069959 to 150069960 1 - TSS region transcription start site region 14126
Ptgs2os 1 150074873 to 150099874 25001 - lncRNA gene prostaglandin-endoperoxide synthase 2, opposite strand
Tssr14127 1 150099540 to 150099555 15 - TSS region transcription start site region 14127
Tssr14128 1 150099571 to 150099610 39 - TSS region transcription start site region 14128
Cpgi844 1 150099636 to 150100321 685 CpG island CpG island 844
Tssr14129 1 150099668 to 150099685 17 - TSS region transcription start site region 14129
Tssr9221 1 150099736 to 150099757 21 + TSS region transcription start site region 9221
Ptgs2 1 150100031 to 150108227 8196 + protein coding gene prostaglandin-endoperoxide synthase 2
Tssr9222 1 150100093 to 150100106 13 + TSS region transcription start site region 9222
Tssr9223 1 150100946 to 150100949 3 + TSS region transcription start site region 9223
Tssr9224 1 150100964 to 150101057 93 + TSS region transcription start site region 9224
Tssr9225 1 150101171 to 150101182 11 + TSS region transcription start site region 9225
Tssr9226 1 150101184 to 150101195 11 + TSS region transcription start site region 9226
Tssr9227 1 150101204 to 150101273 69 + TSS region transcription start site region 9227
Tssr14130 1 150101242 to 150101262 20 - TSS region transcription start site region 14130
Tssr14131 1 150101265 to 150101318 53 - TSS region transcription start site region 14131
Tssr9228 1 150101295 to 150101313 18 + TSS region transcription start site region 9228
Tssr9229 1 150101317 to 150101326 9 + TSS region transcription start site region 9229
Tssr9230 1 150101977 to 150102113 136 + TSS region transcription start site region 9230
Tssr9231 1 150102129 to 150102146 17 + TSS region transcription start site region 9231
Tssr9232 1 150102169 to 150102189 20 + TSS region transcription start site region 9232
Tssr9233 1 150102642 to 150102645 3 + TSS region transcription start site region 9233
Tssr9234 1 150102646 to 150102674 28 + TSS region transcription start site region 9234
Tssr9235 1 150102686 to 150102705 19 + TSS region transcription start site region 9235
Tssr9236 1 150102723 to 150102730 7 + TSS region transcription start site region 9236
Tssr9237 1 150102742 to 150102762 20 + TSS region transcription start site region 9237
Tssr9238 1 150102771 to 150102793 22 + TSS region transcription start site region 9238
Tssr242 1 150102800 to 150102805 5 + TSS region transcription start site region 242
Tssr9239 1 150102812 to 150102827 15 + TSS region transcription start site region 9239
Tssr9240 1 150102834 to 150102841 7 + TSS region transcription start site region 9240
Tssr9241 1 150102860 to 150102871 11 + TSS region transcription start site region 9241
Tssr9242 1 150102880 to 150102887 7 + TSS region transcription start site region 9242
Tssr9243 1 150103004 to 150103014 10 + TSS region transcription start site region 9243
Tssr9244 1 150103049 to 150103065 16 + TSS region transcription start site region 9244
Tssr9245 1 150103069 to 150103101 32 + TSS region transcription start site region 9245
Tssr9246 1 150103106 to 150103120 14 + TSS region transcription start site region 9246
Tssr9247 1 150103245 to 150103255 10 + TSS region transcription start site region 9247
Tssr9248 1 150103665 to 150103688 23 + TSS region transcription start site region 9248
Tssr9249 1 150103692 to 150103702 10 + TSS region transcription start site region 9249
Tssr9250 1 150103860 to 150103903 43 + TSS region transcription start site region 9250
Tssr9251 1 150103906 to 150103955 49 + TSS region transcription start site region 9251
Tssr9252 1 150103961 to 150103990 29 + TSS region transcription start site region 9252
Tssr9253 1 150103991 to 150104015 24 + TSS region transcription start site region 9253
Tssr9254 1 150104018 to 150104031 13 + TSS region transcription start site region 9254
Tssr9255 1 150104037 to 150104082 45 + TSS region transcription start site region 9255
Tssr9256 1 150104277 to 150104287 10 + TSS region transcription start site region 9256
Tssr9257 1 150104301 to 150104321 20 + TSS region transcription start site region 9257
Tssr9258 1 150104324 to 150104337 13 + TSS region transcription start site region 9258
Tssr9259 1 150104349 to 150104394 45 + TSS region transcription start site region 9259
Tssr9260 1 150104404 to 150104446 42 + TSS region transcription start site region 9260
Tssr9261 1 150104459 to 150104465 6 + TSS region transcription start site region 9261
Tssr9262 1 150104467 to 150104486 19 + TSS region transcription start site region 9262
Tssr9263 1 150104489 to 150104498 9 + TSS region transcription start site region 9263
Tssr9264 1 150104534 to 150104547 13 + TSS region transcription start site region 9264
Tssr9265 1 150104565 to 150104574 9 + TSS region transcription start site region 9265
Tssr9266 1 150104654 to 150104663 9 + TSS region transcription start site region 9266
Tssr9267 1 150104945 to 150104998 53 + TSS region transcription start site region 9267
Tssr9268 1 150105001 to 150105068 67 + TSS region transcription start site region 9268
Tssr9269 1 150105384 to 150105405 21 + TSS region transcription start site region 9269
Tssr9270 1 150105424 to 150105436 12 + TSS region transcription start site region 9270
Tssr9271 1 150105448 to 150105459 11 + TSS region transcription start site region 9271
Tssr9272 1 150105478 to 150105490 12 + TSS region transcription start site region 9272
Tssr9273 1 150105530 to 150105534 4 + TSS region transcription start site region 9273
Tssr9274 1 150105548 to 150105554 6 + TSS region transcription start site region 9274
Tssr9275 1 150105575 to 150105586 11 + TSS region transcription start site region 9275
Tssr9276 1 150105590 to 150105600 10 + TSS region transcription start site region 9276
Tssr9277 1 150105640 to 150105656 16 + TSS region transcription start site region 9277
Tssr9278 1 150105661 to 150105677 16 + TSS region transcription start site region 9278
Tssr9279 1 150105682 to 150105695 13 + TSS region transcription start site region 9279
Tssr9280 1 150105699 to 150105795 96 + TSS region transcription start site region 9280
Tssr9281 1 150105805 to 150105815 10 + TSS region transcription start site region 9281
Tssr9282 1 150105840 to 150105849 9 + TSS region transcription start site region 9282
Tssr9283 1 150105854 to 150105864 10 + TSS region transcription start site region 9283
Tssr9284 1 150105869 to 150105876 7 + TSS region transcription start site region 9284
Tssr9285 1 150105879 to 150105890 11 + TSS region transcription start site region 9285
Tssr9286 1 150105963 to 150105969 6 + TSS region transcription start site region 9286
Tssr9287 1 150106476 to 150106485 9 + TSS region transcription start site region 9287
Tssr9288 1 150106592 to 150106599 7 + TSS region transcription start site region 9288
Tssr9289 1 150106609 to 150106616 7 + TSS region transcription start site region 9289
Tssr9290 1 150106765 to 150106770 5 + TSS region transcription start site region 9290
Tssr9291 1 150106811 to 150106818 7 + TSS region transcription start site region 9291
Tssr9292 1 150106930 to 150106946 16 + TSS region transcription start site region 9292
Tssr9293 1 150106959 to 150106962 3 + TSS region transcription start site region 9293
Tssr9294 1 150106979 to 150106985 6 + TSS region transcription start site region 9294
Tssr9295 1 150106995 to 150107012 17 + TSS region transcription start site region 9295
Tssr9296 1 150107017 to 150107024 7 + TSS region transcription start site region 9296
Tssr9297 1 150107026 to 150107037 11 + TSS region transcription start site region 9297
Tssr9298 1 150107052 to 150107063 11 + TSS region transcription start site region 9298
Tssr9299 1 150107074 to 150107081 7 + TSS region transcription start site region 9299
Tssr9300 1 150107091 to 150107100 9 + TSS region transcription start site region 9300
Tssr9301 1 150107225 to 150107233 8 + TSS region transcription start site region 9301
Tssr9302 1 150107255 to 150107257 2 + TSS region transcription start site region 9302
Tssr9303 1 150107317 to 150107333 16 + TSS region transcription start site region 9303
Tssr9304 1 150107341 to 150107353 12 + TSS region transcription start site region 9304
Tssr9305 1 150107359 to 150107362 3 + TSS region transcription start site region 9305
Tssr9306 1 150107371 to 150107374 3 + TSS region transcription start site region 9306
Tssr9307 1 150107375 to 150107400 25 + TSS region transcription start site region 9307
Tssr9308 1 150107408 to 150107417 9 + TSS region transcription start site region 9308
Tssr9309 1 150107422 to 150107439 17 + TSS region transcription start site region 9309
Tssr9310 1 150107453 to 150107464 11 + TSS region transcription start site region 9310
Tssr9311 1 150107465 to 150107487 22 + TSS region transcription start site region 9311
Tssr9312 1 150107490 to 150107505 15 + TSS region transcription start site region 9312
Tssr9313 1 150107510 to 150107513 3 + TSS region transcription start site region 9313
Tssr9314 1 150107521 to 150107532 11 + TSS region transcription start site region 9314
Tssr9315 1 150107615 to 150107624 9 + TSS region transcription start site region 9315
Tssr9316 1 150107798 to 150107809 11 + TSS region transcription start site region 9316
Tssr9317 1 150108075 to 150108095 20 + TSS region transcription start site region 9317
Tssr9318 1 150108804 to 150108823 19 + TSS region transcription start site region 9318
Gm9687 1 150145968 to 150146569 601 + pseudogene predicted gene 9687
Ptgs2os2 1 150159043 to 150164948 5905 - lincRNA gene prostaglandin-endoperoxide synthase 2, opposite strand 2
Tssr14132 1 150164818 to 150164826 8 - TSS region transcription start site region 14132
Tssr14133 1 150164849 to 150164874 25 - TSS region transcription start site region 14133
Tssr14134 1 150164904 to 150164916 12 - TSS region transcription start site region 14134
Tssr14135 1 150164943 to 150164964 21 - TSS region transcription start site region 14135
Tssr14136 1 150164982 to 150164991 9 - TSS region transcription start site region 14136
Tssr14137 1 150165052 to 150165080 28 - TSS region transcription start site region 14137
Tssr9319 1 150165130 to 150165147 17 + TSS region transcription start site region 9319