Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:143749338-147152474

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106 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tli1 1 114126256 to 143821286 29695030 heritable phenotypic marker T lymphoma induced 1
Glrx2 1 143739224 to 143749678 10454 + protein coding gene glutaredoxin 2 (thioltransferase)
Ro60 1 143750790 to 143777058 26268 - protein coding gene Ro60, Y RNA binding protein
Cpgi837 1 143776397 to 143778060 1663 CpG island CpG island 837
Tssr14094 1 143776973 to 143777039 66 - TSS region transcription start site region 14094
Tssr9196 1 143777263 to 143777327 64 + TSS region transcription start site region 9196
Uchl5 1 143777272 to 143807466 30194 + protein coding gene ubiquitin carboxyl-terminal esterase L5
Tssr9197 1 143777332 to 143777345 13 + TSS region transcription start site region 9197
Gm29170 1 143777642 to 143781307 3665 + sense intronic lncRNA gene predicted gene 29170
Gm25663 1 143778928 to 143779062 134 + snoRNA gene predicted gene, 25663
Tssr9198 1 143803653 to 143803657 4 + TSS region transcription start site region 9198
D1Mit423 1 143821162 to 143821286 124 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 423
Tssr239 1 143908237 to 143908239 2 + TSS region transcription start site region 239
D1Mit100 1 143909574 to 143909817 243 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 100
D1Dcr10 1 143909593 to 143909773 180 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 10
Tssr9199 1 143916774 to 143916785 11 + TSS region transcription start site region 9199
Tssr9200 1 143917827 to 143917842 15 + TSS region transcription start site region 9200
Gm41964 1 143938609 to 143998781 60172 + lncRNA gene predicted gene, 41964
D1Ertd185e 1 143949193 to 143949392 199 DNA segment DNA segment, Chr 1, ERATO Doi 185, expressed
Rgs2 1 143999338 to 144004149 4811 - protein coding gene regulator of G-protein signaling 2
Emo5 1 143999338 to 146902474 2903136 QTL emotionality 5
Tssr9201 1 144001584 to 144001616 32 + TSS region transcription start site region 9201
Tssr14095 1 144002247 to 144002266 19 - TSS region transcription start site region 14095
Tssr14096 1 144002270 to 144002287 17 - TSS region transcription start site region 14096
Tssr14097 1 144002802 to 144002817 15 - TSS region transcription start site region 14097
Tssr14098 1 144003827 to 144003869 42 - TSS region transcription start site region 14098
Cpgi838 1 144003923 to 144004582 659 CpG island CpG island 838
Tssr14099 1 144003971 to 144004014 43 - TSS region transcription start site region 14099
Tssr14100 1 144004142 to 144004155 13 - TSS region transcription start site region 14100
Tssr9202 1 144004382 to 144004405 23 + TSS region transcription start site region 9202
Tssr9203 1 144004451 to 144004460 9 + TSS region transcription start site region 9203
Tssr14101 1 144076777 to 144076788 11 - TSS region transcription start site region 14101
Tssr14102 1 144077403 to 144077435 32 - TSS region transcription start site region 14102
Tssr9204 1 144077583 to 144077593 10 + TSS region transcription start site region 9204
Gm35356 1 144080639 to 144118676 38037 + lncRNA gene predicted gene, 35356
Gm18449 1 144103946 to 144104849 903 + pseudogene predicted gene, 18449
Rgs13 1 144138654 to 144177372 38718 - protein coding gene regulator of G-protein signaling 13
Tssr14103 1 144177185 to 144177196 11 - TSS region transcription start site region 14103
Tssr14104 1 144177259 to 144177281 22 - TSS region transcription start site region 14104
Gm35415 1 144197418 to 144200826 3408 + lncRNA gene predicted gene, 35415
Tssr14105 1 144200560 to 144200571 11 - TSS region transcription start site region 14105
D1Mit499 1 144210635 to 144210757 122 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 499
Rbm6-ps2 1 144221979 to 144223650 1671 - pseudogene RNA binding motif protein 6, pseudogene 2
Rgs1 1 144244669 to 144249104 4435 - protein coding gene regulator of G-protein signaling 1
Tssr14106 1 144245174 to 144245219 45 - TSS region transcription start site region 14106
Tssr14107 1 144249049 to 144249067 18 - TSS region transcription start site region 14107
Tssr14108 1 144249099 to 144249113 14 - TSS region transcription start site region 14108
Tssr14109 1 144249134 to 144249146 12 - TSS region transcription start site region 14109
Tssr9205 1 144249383 to 144249390 7 + TSS region transcription start site region 9205
D1Mit395 1 144277279 to 144277375 96 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 395
Tssr14110 1 144307162 to 144307194 32 - TSS region transcription start site region 14110
Gm7266 1 144312032 to 144312436 404 - pseudogene predicted gene 7266
Tssr9206 1 144317867 to 144317880 13 + TSS region transcription start site region 9206
Tssr9207 1 144317891 to 144317894 3 + TSS region transcription start site region 9207
Tssr9208 1 144317901 to 144317911 10 + TSS region transcription start site region 9208
Tssr9209 1 144317916 to 144317929 13 + TSS region transcription start site region 9209
Tssr14111 1 144330350 to 144330362 12 - TSS region transcription start site region 14111
Slpapn2 1 144491111 to 144491111 0 QTL average percent sleep per night 2
Rgs21 1 144519690 to 144567667 47977 - protein coding gene regulator of G-protein signalling 21
Gm23672 1 144609004 to 144609110 106 - snRNA gene predicted gene, 23672
Tssr14112 1 144609106 to 144609114 8 - TSS region transcription start site region 14112
Rgs18 1 144752692 to 144775421 22729 - protein coding gene regulator of G-protein signaling 18
Tssr14113 1 144775419 to 144775438 19 - TSS region transcription start site region 14113
Tssr14114 1 144775444 to 144775451 7 - TSS region transcription start site region 14114
Tssr9210 1 144952890 to 144952908 18 + TSS region transcription start site region 9210
Gm8856 1 144952928 to 144954071 1143 + pseudogene predicted gene 8856
Cpgi839 1 144953815 to 144953991 176 CpG island CpG island 839
Tssr14115 1 144954800 to 144954801 1 - TSS region transcription start site region 14115
Gm22681 1 144960734 to 144960839 105 - snRNA gene predicted gene, 22681
Tssr9211 1 144967618 to 144967619 1 + TSS region transcription start site region 9211
Gm25708 1 144979484 to 144979585 101 - miRNA gene predicted gene, 25708
D1Mit496 1 145009771 to 145009893 122 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 496
Gm6550 1 145164951 to 145165943 992 - pseudogene predicted gene 6550
Tssr9212 1 145183819 to 145183829 10 + TSS region transcription start site region 9212
Gm5262 1 145183894 to 145184889 995 + pseudogene predicted gene 5262
Gm25460 1 145291354 to 145291480 126 - snoRNA gene predicted gene, 25460
Gm28392 1 145315156 to 145315548 392 - pseudogene predicted gene 28392
Gm38269 1 145323394 to 145326691 3297 - unclassified gene predicted gene, 38269
D1Mit101 1 145459386 to 145459554 168 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 101
D1Mit198 1 145973493 to 145973607 114 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 198
Gm46245 1 146198996 to 146202678 3682 - pseudogene predicted gene, 46245
Emo3 1 146255120 to 146255255 135 QTL emotionality 3
D1Mit264 1 146255120 to 146255255 135 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 264
Gm41965 1 146308481 to 146313226 4745 - lncRNA gene predicted gene, 41965
Tssr9213 1 146323197 to 146323206 9 + TSS region transcription start site region 9213
Gm5263 1 146420434 to 146420974 540 + pseudogene predicted gene 5263
Gm29514 1 146422844 to 146495041 72197 - antisense lncRNA gene predicted gene 29514
Gm38187 1 146477647 to 146482355 4708 - unclassified gene predicted gene, 38187
Tssr9214 1 146495599 to 146495606 7 + TSS region transcription start site region 9214
Tssr9215 1 146495621 to 146495636 15 + TSS region transcription start site region 9215
Tssr9216 1 146495644 to 146495679 35 + TSS region transcription start site region 9216
Brinp3 1 146495666 to 146902474 406808 + protein coding gene bone morphogenetic protein/retinoic acid inducible neural specific 3
Tssr9217 1 146495687 to 146495693 6 + TSS region transcription start site region 9217
Tssr9218 1 146495698 to 146495707 9 + TSS region transcription start site region 9218
Cpgi840 1 146497365 to 146497581 216 CpG island CpG island 840
Tssr9219 1 146497671 to 146497707 36 + TSS region transcription start site region 9219
Cpgi841 1 146497866 to 146498139 273 CpG island CpG island 841
Cpgi842 1 146724897 to 146725066 169 CpG island CpG island 842
Gm15583 1 146725581 to 146729090 3509 + pseudogene predicted gene 15583
Tssr9220 1 146774186 to 146774196 10 + TSS region transcription start site region 9220
A230059L01Rik 1 146802965 to 146807340 4375 - unclassified gene RIKEN cDNA A230059L01 gene
Edvq2 1 146807769 to 146807769 0 QTL endothelium dependent vasorelaxation QTL 2
Gm15584 1 146809831 to 146841696 31865 - antisense lncRNA gene predicted gene 15584
D1Mit194 1 147032461 to 147032610 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 194
Ap1q 1 147032461 to 167758653 20726192 QTL alcohol preference 1 QTL
Gm37749 1 147089037 to 147090935 1898 + unclassified gene predicted gene, 37749