Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:143644214-143835174

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tli1 1 114126256 to 143821286 29695030 heritable phenotypic marker T lymphoma induced 1
Cdc73 1 143603276 to 143702893 99617 - protein coding gene cell division cycle 73, Paf1/RNA polymerase II complex component
B3galt2 1 143640697 to 143649937 9240 + protein coding gene UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
Tssr14088 1 143666852 to 143666858 6 - TSS region transcription start site region 14088
Tssr14089 1 143676039 to 143676043 4 - TSS region transcription start site region 14089
Tssr14090 1 143679689 to 143679715 26 - TSS region transcription start site region 14090
Tssr9192 1 143681924 to 143681933 9 + TSS region transcription start site region 9192
Gm6397 1 143683230 to 143684298 1068 + pseudogene predicted gene 6397
Cpgi835 1 143702056 to 143703488 1432 CpG island CpG island 835
Tssr14091 1 143702782 to 143702797 15 - TSS region transcription start site region 14091
Tssr14092 1 143702804 to 143702829 25 - TSS region transcription start site region 14092
Tssr14093 1 143702832 to 143702847 15 - TSS region transcription start site region 14093
Gm38658 1 143719083 to 143721979 2896 + lncRNA gene predicted gene, 38658
Edvq1 1 143720788 to 143720788 0 QTL endothelium dependent vasorelaxation QTL 1
Gm46161 1 143734643 to 143739088 4445 - lncRNA gene predicted gene, 46161
Tssr9193 1 143739016 to 143739050 34 + TSS region transcription start site region 9193
Cpgi836 1 143739214 to 143740174 960 CpG island CpG island 836
Glrx2 1 143739224 to 143749678 10454 + protein coding gene glutaredoxin 2 (thioltransferase)
Tssr9194 1 143739551 to 143739566 15 + TSS region transcription start site region 9194
Tssr9195 1 143739573 to 143739642 69 + TSS region transcription start site region 9195
Ro60 1 143750790 to 143777058 26268 - protein coding gene Ro60, Y RNA binding protein
Cpgi837 1 143776397 to 143778060 1663 CpG island CpG island 837
Tssr14094 1 143776973 to 143777039 66 - TSS region transcription start site region 14094
Tssr9196 1 143777263 to 143777327 64 + TSS region transcription start site region 9196
Uchl5 1 143777272 to 143807466 30194 + protein coding gene ubiquitin carboxyl-terminal esterase L5
Tssr9197 1 143777332 to 143777345 13 + TSS region transcription start site region 9197
Gm29170 1 143777642 to 143781307 3665 + sense intronic lncRNA gene predicted gene 29170
Gm25663 1 143778928 to 143779062 134 + snoRNA gene predicted gene, 25663
Tssr9198 1 143803653 to 143803657 4 + TSS region transcription start site region 9198
D1Mit423 1 143821162 to 143821286 124 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 423