Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:139501254-140061282

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr9177 1 139501679 to 139501690 11 + TSS region transcription start site region 9177
Tssr9178 1 139501692 to 139501726 34 + TSS region transcription start site region 9178
F13b 1 139501702 to 139523752 22050 + protein coding gene coagulation factor XIII, beta subunit
Tssr9179 1 139501734 to 139501746 12 + TSS region transcription start site region 9179
Cfhr1 1 139547064 to 139560222 13158 - protein coding gene complement factor H-related 1
Tssr14065 1 139560213 to 139560229 16 - TSS region transcription start site region 14065
Cfhr3 1 139584783 to 139660899 76116 - pseudogene complement factor H-related 3
Tssr14066 1 139631950 to 139631960 10 - TSS region transcription start site region 14066
Tssr14067 1 139660918 to 139660945 27 - TSS region transcription start site region 14067
Tssr236 1 139660972 to 139661006 34 - TSS region transcription start site region 236
Gm26271 1 139671604 to 139671707 103 + snRNA gene predicted gene, 26271
Gm4788 1 139697919 to 139781239 83320 - protein coding gene predicted gene 4788
Tssr14068 1 139699161 to 139699163 2 - TSS region transcription start site region 14068
Tssr14069 1 139781254 to 139781282 28 - TSS region transcription start site region 14069
Gm25619 1 139786983 to 139787086 103 + snRNA gene predicted gene, 25619
Gm41963 1 139804165 to 139806699 2534 - lncRNA gene predicted gene, 41963
Cfhr2 1 139810292 to 139858699 48407 - protein coding gene complement factor H-related 2
Tssr14070 1 139858684 to 139858729 45 - TSS region transcription start site region 14070
Gm16332 1 139878094 to 139936455 58361 - pseudogene predicted gene 16332
Tssr14071 1 139923100 to 139923102 2 - TSS region transcription start site region 14071
Gm5837 1 139928240 to 139929608 1368 - pseudogene predicted gene 5837
Gm5834 1 139939601 to 139994205 54604 - pseudogene predicted pseudogene 5834
D1Mit199 1 139949748 to 139949862 114 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 199
Tssr14072 1 139982134 to 139982135 1 - TSS region transcription start site region 14072
Tssr14073 1 139990668 to 139990672 4 - TSS region transcription start site region 14073
V125Dq3 1 140000000 to 140000000 0 QTL vitamin D active form serum level QTL 3
Gm38266 1 140000549 to 140000969 420 + pseudogene predicted gene, 38266
Gm26048 1 140003825 to 140003966 141 + snoRNA gene predicted gene, 26048
Tssr14074 1 140018868 to 140018882 14 - TSS region transcription start site region 14074
Gm38019 1 140038433 to 140049029 10596 - pseudogene predicted gene, 38019