Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:139477919-140001239

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Aspm	1	139454772 to 139494091	39319	+	protein coding gene	abnormal spindle microtubule assembly
Tssr235	1	139483522 to 139483527	5	+	TSS region	transcription start site region 235
Tssr9176	1	139491491 to 139491527	36	+	TSS region	transcription start site region 9176
Tssr14064	1	139494684 to 139494696	12	-	TSS region	transcription start site region 14064
Tssr9177	1	139501679 to 139501690	11	+	TSS region	transcription start site region 9177
Tssr9178	1	139501692 to 139501726	34	+	TSS region	transcription start site region 9178
F13b	1	139501702 to 139523752	22050	+	protein coding gene	coagulation factor XIII, beta subunit
Tssr9179	1	139501734 to 139501746	12	+	TSS region	transcription start site region 9179
Cfhr1	1	139547064 to 139560222	13158	-	protein coding gene	complement factor H-related 1
Tssr14065	1	139560213 to 139560229	16	-	TSS region	transcription start site region 14065
Cfhr3	1	139584783 to 139660899	76116	-	pseudogene	complement factor H-related 3
Tssr14066	1	139631950 to 139631960	10	-	TSS region	transcription start site region 14066
Tssr14067	1	139660918 to 139660945	27	-	TSS region	transcription start site region 14067
Tssr236	1	139660972 to 139661006	34	-	TSS region	transcription start site region 236
Gm26271	1	139671604 to 139671707	103	+	snRNA gene	predicted gene, 26271
Gm4788	1	139697919 to 139781239	83320	-	protein coding gene	predicted gene 4788
Tssr14068	1	139699161 to 139699163	2	-	TSS region	transcription start site region 14068
Tssr14069	1	139781254 to 139781282	28	-	TSS region	transcription start site region 14069
Gm25619	1	139786983 to 139787086	103	+	snRNA gene	predicted gene, 25619
Gm41963	1	139804165 to 139806699	2534	-	lncRNA gene	predicted gene, 41963
Cfhr2	1	139810292 to 139858699	48407	-	protein coding gene	complement factor H-related 2
Tssr14070	1	139858684 to 139858729	45	-	TSS region	transcription start site region 14070
Gm16332	1	139878094 to 139936455	58361	-	pseudogene	predicted gene 16332
Tssr14071	1	139923100 to 139923102	2	-	TSS region	transcription start site region 14071
Gm5837	1	139928240 to 139929608	1368	-	pseudogene	predicted gene 5837
Gm5834	1	139939601 to 139994205	54604	-	pseudogene	predicted pseudogene 5834
D1Mit199	1	139949748 to 139949862	114		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 199
Tssr14072	1	139982134 to 139982135	1	-	TSS region	transcription start site region 14072
Tssr14073	1	139990668 to 139990672	4	-	TSS region	transcription start site region 14073
V125Dq3	1	140000000 to 140000000	0		QTL	vitamin D active form serum level QTL 3
Gm38266	1	140000549 to 140000969	420	+	pseudogene	predicted gene, 38266