Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:139416950-139846960

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi832 1 139421686 to 139422856 1170 CpG island CpG island 832
Tssr9172 1 139422196 to 139422263 67 + TSS region transcription start site region 9172
Zbtb41 1 139422288 to 139453005 30717 + protein coding gene zinc finger and BTB domain containing 41
Gm41962 1 139424883 to 139435956 11073 - lncRNA gene predicted gene, 41962
Tssr14063 1 139436889 to 139436909 20 - TSS region transcription start site region 14063
Cpgi833 1 139454535 to 139455561 1026 CpG island CpG island 833
Tssr9173 1 139454747 to 139454825 78 + TSS region transcription start site region 9173
Aspm 1 139454772 to 139494091 39319 + protein coding gene abnormal spindle microtubule assembly
Tssr9174 1 139454828 to 139454842 14 + TSS region transcription start site region 9174
Tssr9175 1 139454845 to 139454869 24 + TSS region transcription start site region 9175
Tssr235 1 139483522 to 139483527 5 + TSS region transcription start site region 235
Tssr9176 1 139491491 to 139491527 36 + TSS region transcription start site region 9176
Tssr14064 1 139494684 to 139494696 12 - TSS region transcription start site region 14064
Tssr9177 1 139501679 to 139501690 11 + TSS region transcription start site region 9177
Tssr9178 1 139501692 to 139501726 34 + TSS region transcription start site region 9178
F13b 1 139501702 to 139523752 22050 + protein coding gene coagulation factor XIII, beta subunit
Tssr9179 1 139501734 to 139501746 12 + TSS region transcription start site region 9179
Cfhr1 1 139547064 to 139560222 13158 - protein coding gene complement factor H-related 1
Tssr14065 1 139560213 to 139560229 16 - TSS region transcription start site region 14065
Cfhr3 1 139584783 to 139660899 76116 - pseudogene complement factor H-related 3
Tssr14066 1 139631950 to 139631960 10 - TSS region transcription start site region 14066
Tssr14067 1 139660918 to 139660945 27 - TSS region transcription start site region 14067
Tssr236 1 139660972 to 139661006 34 - TSS region transcription start site region 236
Gm26271 1 139671604 to 139671707 103 + snRNA gene predicted gene, 26271
Gm4788 1 139697919 to 139781239 83320 - protein coding gene predicted gene 4788
Tssr14068 1 139699161 to 139699163 2 - TSS region transcription start site region 14068
Tssr14069 1 139781254 to 139781282 28 - TSS region transcription start site region 14069
Gm25619 1 139786983 to 139787086 103 + snRNA gene predicted gene, 25619
Gm41963 1 139804165 to 139806699 2534 - lncRNA gene predicted gene, 41963
Cfhr2 1 139810292 to 139858699 48407 - protein coding gene complement factor H-related 2