Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:138963918-139367691

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi831 1 138963059 to 138964308 1249 CpG island CpG island 831
Dennd1b 1 138963220 to 139176043 212823 + protein coding gene DENN/MADD domain containing 1B
Gm37423 1 138968510 to 138971851 3341 + unclassified non-coding RNA gene predicted gene, 37423
Tssr9168 1 138971234 to 138971245 11 + TSS region transcription start site region 9168
4930596I21Rik 1 138977657 to 138979246 1589 + sense intronic lncRNA gene RIKEN cDNA 4930596I21 gene
Gm18553 1 138983872 to 138984480 608 - pseudogene predicted gene, 18553
Gm16305 1 138991514 to 138992069 555 - pseudogene predicted gene 16305
Gm37470 1 139030185 to 139032982 2797 + unclassified gene predicted gene, 37470
Tssr9169 1 139056758 to 139056763 5 + TSS region transcription start site region 9169
Gm43544 1 139070213 to 139072684 2471 + unclassified gene predicted gene 43544
Gm37655 1 139082862 to 139086984 4122 - unclassified gene predicted gene, 37655
Gm16304 1 139133891 to 139134665 774 - pseudogene predicted gene 16304
Gm37718 1 139155152 to 139157782 2630 + unclassified gene predicted gene, 37718
Gm41960 1 139163918 to 139167691 3773 - lncRNA gene predicted gene, 41960
Tssr9170 1 139172060 to 139172072 12 + TSS region transcription start site region 9170
Crb1 1 139197056 to 139377100 180044 - protein coding gene crumbs family member 1, photoreceptor morphogenesis associated
Tssr14054 1 139214802 to 139214805 3 - TSS region transcription start site region 14054
Tssr14055 1 139255674 to 139255683 9 - TSS region transcription start site region 14055
Tssr14056 1 139255711 to 139255728 17 - TSS region transcription start site region 14056
Tssr14057 1 139255755 to 139255765 10 - TSS region transcription start site region 14057
Tssr9171 1 139268285 to 139268289 4 + TSS region transcription start site region 9171
D1Mit394 1 139280373 to 139280497 124 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 394
Tssr14058 1 139304767 to 139304774 7 - TSS region transcription start site region 14058