Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:138751983-138956852

20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lhx9	1	138825186 to 138848577	23391	-	protein coding gene	LIM homeobox protein 9
Cpgi824	1	138831439 to 138831658	219		CpG island	CpG island 824
Cpgi825	1	138838331 to 138838671	340		CpG island	CpG island 825
Cpgi826	1	138839899 to 138840250	351		CpG island	CpG island 826
Cpgi827	1	138841482 to 138842051	569		CpG island	CpG island 827
Tssr14047	1	138842437 to 138842455	18	-	TSS region	transcription start site region 14047
Tssr14048	1	138842465 to 138842477	12	-	TSS region	transcription start site region 14048
Cpgi828	1	138843492 to 138843946	454		CpG island	CpG island 828
Tssr14049	1	138847387 to 138847399	12	-	TSS region	transcription start site region 14049
Tssr14050	1	138847616 to 138847631	15	-	TSS region	transcription start site region 14050
Cpgi829	1	138848059 to 138849110	1051		CpG island	CpG island 829
Tssr14051	1	138848588 to 138848603	15	-	TSS region	transcription start site region 14051
2310009B15Rik	1	138851983 to 138856852	4869	-	protein coding gene	RIKEN cDNA 2310009B15 gene
Cpgi830	1	138856500 to 138856964	464		CpG island	CpG island 830
Tssr14052	1	138856819 to 138856848	29	-	TSS region	transcription start site region 14052
1700019P21Rik	1	138876272 to 138876951	679	-	lincRNA gene	RIKEN cDNA 1700019P21 gene
Tssr14053	1	138876930 to 138876952	22	-	TSS region	transcription start site region 14053
n-R5s217	1	138878262 to 138878377	115	-	rRNA gene	nuclear encoded rRNA 5S 217
Tssr9162	1	138913657 to 138913662	5	+	TSS region	transcription start site region 9162
Gm3933	1	138915605 to 138916043	438	-	pseudogene	predicted gene 3933