Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:137314199-139924207

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283 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700006P03Rik 1 137325434 to 137325842 408 - unclassified gene RIKEN cDNA 1700006P03 gene
Tssr13963 1 137325835 to 137325841 6 - TSS region transcription start site region 13963
Gm34244 1 137353553 to 137357785 4232 + lncRNA gene predicted gene, 34244
Gm23534 1 137367151 to 137367247 96 - snoRNA gene predicted gene, 23534
Cpgi822 1 137425838 to 137426027 189 CpG island CpG island 822
Gm37903 1 137528850 to 137531230 2380 - unclassified gene predicted gene, 37903
D1Mit537 1 137727639 to 137727748 109 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 537
Gm22727 1 137734318 to 137734433 115 + snoRNA gene predicted gene, 22727
Tssr13964 1 137751422 to 137751430 8 - TSS region transcription start site region 13964
Tssr13965 1 137751592 to 137751619 27 - TSS region transcription start site region 13965
Gm37099 1 137764077 to 137767527 3450 - unclassified gene predicted gene, 37099
Gm34306 1 137767853 to 137788163 20310 + lncRNA gene predicted gene, 34306
Tssr13966 1 137806797 to 137806814 17 - TSS region transcription start site region 13966
Tssr9098 1 137807249 to 137807270 21 + TSS region transcription start site region 9098
Gm37293 1 137811849 to 137812143 294 + unclassified gene predicted gene, 37293
Tssr13967 1 137898377 to 137898419 42 - TSS region transcription start site region 13967
Gm4258 1 137898477 to 137960785 62308 + unclassified non-coding RNA gene predicted gene 4258
Tssr9099 1 137898560 to 137898617 57 + TSS region transcription start site region 9099
A630083H20Rik 1 137898594 to 137899728 1134 unclassified gene RIKEN cDNA A630083H20 gene
Tssr9100 1 137898625 to 137898628 3 + TSS region transcription start site region 9100
Tssr9101 1 137898654 to 137898664 10 + TSS region transcription start site region 9101
Tssr9102 1 137898677 to 137898701 24 + TSS region transcription start site region 9102
Tssr9103 1 137898709 to 137898731 22 + TSS region transcription start site region 9103
Tssr9104 1 137899400 to 137899415 15 + TSS region transcription start site region 9104
Tssr9105 1 137901180 to 137901190 10 + TSS region transcription start site region 9105
Tssr9106 1 137906030 to 137906059 29 + TSS region transcription start site region 9106
Tssr9107 1 137906086 to 137906097 11 + TSS region transcription start site region 9107
Tssr9108 1 137906761 to 137906770 9 + TSS region transcription start site region 9108
Tssr9109 1 137906783 to 137906792 9 + TSS region transcription start site region 9109
Tssr9110 1 137906805 to 137906825 20 + TSS region transcription start site region 9110
Tssr9111 1 137906843 to 137906857 14 + TSS region transcription start site region 9111
Tssr9112 1 137907026 to 137907027 1 + TSS region transcription start site region 9112
Tssr9113 1 137908912 to 137908949 37 + TSS region transcription start site region 9113
Gm37298 1 137909291 to 137913158 3867 + unclassified gene predicted gene, 37298
Tssr9114 1 137912853 to 137912858 5 + TSS region transcription start site region 9114
Tssr9115 1 137916573 to 137916580 7 + TSS region transcription start site region 9115
Gm26979 1 137917690 to 137921312 3622 - lincRNA gene predicted gene, 26979
Tssr9116 1 137918773 to 137918781 8 + TSS region transcription start site region 9116
Tssr9117 1 137920683 to 137920694 11 + TSS region transcription start site region 9117
Tssr9118 1 137920887 to 137920900 13 + TSS region transcription start site region 9118
Gm37124 1 137924388 to 137926379 1991 + unclassified gene predicted gene, 37124
Tssr9119 1 137924892 to 137924904 12 + TSS region transcription start site region 9119
Tssr9120 1 137924988 to 137925010 22 + TSS region transcription start site region 9120
A130050O07Rik 1 137927251 to 137930273 3022 + unclassified gene RIKEN cDNA A130050O07 gene
Tssr9121 1 137928100 to 137928135 35 + TSS region transcription start site region 9121
Gm26936 1 137928389 to 137969240 40851 - lincRNA gene predicted gene, 26936
Tssr9122 1 137931747 to 137931764 17 + TSS region transcription start site region 9122
Tssr9123 1 137931785 to 137931796 11 + TSS region transcription start site region 9123
Tssr9124 1 137931852 to 137931863 11 + TSS region transcription start site region 9124
Gm26930 1 137932041 to 137933284 1243 + sense intronic lncRNA gene predicted gene, 26930
D130019J16Rik 1 137935189 to 137937346 2157 + unclassified gene RIKEN cDNA D130019J16 gene
Tssr9125 1 137937025 to 137937030 5 + TSS region transcription start site region 9125
Tssr9126 1 137943156 to 137943188 32 + TSS region transcription start site region 9126
Tssr9127 1 137946005 to 137946009 4 + TSS region transcription start site region 9127
Tssr9128 1 137948685 to 137948690 5 + TSS region transcription start site region 9128
Gm37534 1 137949422 to 137954643 5221 + unclassified gene predicted gene, 37534
C530045E16Rik 1 137957824 to 137960626 2802 unclassified gene RIKEN cDNA C530045E16 gene
Tssr9129 1 137960495 to 137960503 8 + TSS region transcription start site region 9129
Tssr9130 1 137961470 to 137961477 7 + TSS region transcription start site region 9130
Tssr9131 1 137965424 to 137965442 18 + TSS region transcription start site region 9131
Mir181a-1 1 137966455 to 137966541 86 + miRNA gene microRNA 181a-1
Mirc14 1 137966455 to 137966718 263 complex/cluster/region microRNA cluster 14, including Mir181a-1 through Mir181b-1
Tssr9132 1 137966529 to 137966532 3 + TSS region transcription start site region 9132
A430106G13Rik 1 137966531 to 137969918 3387 + lincRNA gene RIKEN cDNA A430106G13 gene
Mir181b-1 1 137966639 to 137966718 79 + miRNA gene microRNA 181b-1
Tssr9133 1 137966710 to 137966715 5 + TSS region transcription start site region 9133
Tssr232 1 137966796 to 137966799 3 + TSS region transcription start site region 232
Tssr9134 1 137967753 to 137967762 9 + TSS region transcription start site region 9134
Tssr13968 1 137969213 to 137969243 30 - TSS region transcription start site region 13968
Tssr9135 1 137969215 to 137969227 12 + TSS region transcription start site region 9135
Tssr9136 1 137969659 to 137969669 10 + TSS region transcription start site region 9136
Tssr9137 1 137971170 to 137971186 16 + TSS region transcription start site region 9137
Gm37632 1 137971174 to 137972315 1141 + unclassified gene predicted gene, 37632
Tssr9138 1 137974631 to 137974639 8 + TSS region transcription start site region 9138
Gm23782 1 137987657 to 137987776 119 - rRNA gene predicted gene, 23782
Gm34353 1 137995762 to 138011958 16196 + lncRNA gene predicted gene, 34353
Ptprc 1 138062861 to 138175708 112847 - protein coding gene protein tyrosine phosphatase, receptor type, C
Tssr13969 1 138064053 to 138064101 48 - TSS region transcription start site region 13969
D1Mit514 1 138064218 to 138064333 115 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-514
Tssr13970 1 138073663 to 138073705 42 - TSS region transcription start site region 13970
Tssr13971 1 138078559 to 138078575 16 - TSS region transcription start site region 13971
Tssr13972 1 138078588 to 138078604 16 - TSS region transcription start site region 13972
Tssr13973 1 138080195 to 138080207 12 - TSS region transcription start site region 13973
Tssr13974 1 138080250 to 138080265 15 - TSS region transcription start site region 13974
Tssr13975 1 138080271 to 138080280 9 - TSS region transcription start site region 13975
Tssr13976 1 138080876 to 138080893 17 - TSS region transcription start site region 13976
Tssr13977 1 138080899 to 138080936 37 - TSS region transcription start site region 13977
Tssr13978 1 138082166 to 138082191 25 - TSS region transcription start site region 13978
Tssr13979 1 138083644 to 138083663 19 - TSS region transcription start site region 13979
Tssr13980 1 138090469 to 138090477 8 - TSS region transcription start site region 13980
Tssr13981 1 138097454 to 138097488 34 - TSS region transcription start site region 13981
Tssr13982 1 138099595 to 138099607 12 - TSS region transcription start site region 13982
Tssr13983 1 138099643 to 138099682 39 - TSS region transcription start site region 13983
Tssr13984 1 138101130 to 138101163 33 - TSS region transcription start site region 13984
Tssr13985 1 138101414 to 138101419 5 - TSS region transcription start site region 13985
Tssr13986 1 138102835 to 138102857 22 - TSS region transcription start site region 13986
Tssr13987 1 138107820 to 138107851 31 - TSS region transcription start site region 13987
Tssr13988 1 138117589 to 138117594 5 - TSS region transcription start site region 13988
Tssr13989 1 138119162 to 138119183 21 - TSS region transcription start site region 13989
Tssr13990 1 138119805 to 138119822 17 - TSS region transcription start site region 13990
Tssr13991 1 138121440 to 138121466 26 - TSS region transcription start site region 13991
Tssr13992 1 138121487 to 138121499 12 - TSS region transcription start site region 13992
Tssr13993 1 138121507 to 138121519 12 - TSS region transcription start site region 13993
Tssr13994 1 138121807 to 138121832 25 - TSS region transcription start site region 13994
Tssr13995 1 138122871 to 138122923 52 - TSS region transcription start site region 13995
Tssr13996 1 138123482 to 138123522 40 - TSS region transcription start site region 13996
Tssr13997 1 138123532 to 138123543 11 - TSS region transcription start site region 13997
Tssr13998 1 138123597 to 138123615 18 - TSS region transcription start site region 13998
Tssr13999 1 138123669 to 138123681 12 - TSS region transcription start site region 13999
Tssr14000 1 138123788 to 138123800 12 - TSS region transcription start site region 14000
Tssr14001 1 138123805 to 138123840 35 - TSS region transcription start site region 14001
Tssr14002 1 138124039 to 138124062 23 - TSS region transcription start site region 14002
Tssr14003 1 138136453 to 138136466 13 - TSS region transcription start site region 14003
Tssr14004 1 138136473 to 138136498 25 - TSS region transcription start site region 14004
Tssr14005 1 138136509 to 138136532 23 - TSS region transcription start site region 14005
Tssr14006 1 138136534 to 138136547 13 - TSS region transcription start site region 14006
Tssr14007 1 138137124 to 138137131 7 - TSS region transcription start site region 14007
Tssr9139 1 138137385 to 138137388 3 + TSS region transcription start site region 9139
Tssr9140 1 138137394 to 138137395 1 + TSS region transcription start site region 9140
Tssr9141 1 138137414 to 138137424 10 + TSS region transcription start site region 9141
Tssr14008 1 138142322 to 138142333 11 - TSS region transcription start site region 14008
Tssr14009 1 138145037 to 138145040 3 - TSS region transcription start site region 14009
Tssr9142 1 138145413 to 138145423 10 + TSS region transcription start site region 9142
Tssr9143 1 138149190 to 138149200 10 + TSS region transcription start site region 9143
Tssr9144 1 138152403 to 138152440 37 + TSS region transcription start site region 9144
Tssr14010 1 138155582 to 138155586 4 - TSS region transcription start site region 14010
Tssr14011 1 138157618 to 138157637 19 - TSS region transcription start site region 14011
Tssr14012 1 138159073 to 138159085 12 - TSS region transcription start site region 14012
Tssr9145 1 138159226 to 138159238 12 + TSS region transcription start site region 9145
A130071D04Rik 1 138161820 to 138167683 5863 - unclassified gene RIKEN cDNA A130071D04 gene
Tssr14013 1 138162544 to 138162557 13 - TSS region transcription start site region 14013
Tssr9146 1 138163114 to 138163127 13 + TSS region transcription start site region 9146
Tssr14014 1 138164757 to 138164766 9 - TSS region transcription start site region 14014
Tssr9147 1 138164934 to 138164941 7 + TSS region transcription start site region 9147
Tssr14015 1 138165188 to 138165200 12 - TSS region transcription start site region 14015
Tssr14016 1 138165266 to 138165287 21 - TSS region transcription start site region 14016
Tssr9148 1 138166677 to 138166681 4 + TSS region transcription start site region 9148
Tssr9149 1 138166770 to 138166782 12 + TSS region transcription start site region 9149
Tssr14017 1 138172152 to 138172166 14 - TSS region transcription start site region 14017
Tssr9150 1 138172297 to 138172300 3 + TSS region transcription start site region 9150
Tssr9151 1 138172304 to 138172315 11 + TSS region transcription start site region 9151
Tssr9152 1 138172713 to 138172731 18 + TSS region transcription start site region 9152
Tssr14018 1 138174282 to 138174304 22 - TSS region transcription start site region 14018
Tssr14019 1 138174311 to 138174339 28 - TSS region transcription start site region 14019
Tssr14020 1 138174343 to 138174348 5 - TSS region transcription start site region 14020
Tssr9153 1 138174447 to 138174458 11 + TSS region transcription start site region 9153
Tssr14021 1 138175181 to 138175198 17 - TSS region transcription start site region 14021
Tssr14022 1 138175238 to 138175254 16 - TSS region transcription start site region 14022
Tssr14023 1 138175283 to 138175311 28 - TSS region transcription start site region 14023
Tssr233 1 138175618 to 138175625 7 - TSS region transcription start site region 233
Tssr14024 1 138175626 to 138175644 18 - TSS region transcription start site region 14024
Tssr9154 1 138175628 to 138175637 9 + TSS region transcription start site region 9154
Tssr14025 1 138175653 to 138175660 7 - TSS region transcription start site region 14025
Tssr14026 1 138175671 to 138175688 17 - TSS region transcription start site region 14026
Tssr9155 1 138175691 to 138175700 9 + TSS region transcription start site region 9155
Tssr14027 1 138175692 to 138175704 12 - TSS region transcription start site region 14027
Tssr14028 1 138175718 to 138175740 22 - TSS region transcription start site region 14028
Tssr14029 1 138175742 to 138175764 22 - TSS region transcription start site region 14029
Tssr14030 1 138175896 to 138175912 16 - TSS region transcription start site region 14030
Tssr14031 1 138175913 to 138175936 23 - TSS region transcription start site region 14031
Tssr9156 1 138180367 to 138180382 15 + TSS region transcription start site region 9156
Gm18667 1 138184101 to 138184584 483 + pseudogene predicted gene, 18667
Gm28556 1 138190194 to 138192127 1933 - lincRNA gene predicted gene 28556
1700113B19Rik 1 138261642 to 138262061 419 + unclassified gene RIKEN cDNA 1700113B19 gene
Tssr9157 1 138273722 to 138273769 47 + TSS region transcription start site region 9157
Atp6v1g3 1 138273738 to 138289462 15724 + protein coding gene ATPase, H+ transporting, lysosomal V1 subunit G3
Tssr9158 1 138273770 to 138273781 11 + TSS region transcription start site region 9158
Tssr234 1 138283546 to 138283556 10 + TSS region transcription start site region 234
Tssr9159 1 138303549 to 138303569 20 + TSS region transcription start site region 9159
Tssr14032 1 138304162 to 138304166 4 - TSS region transcription start site region 14032
Tssr9160 1 138304455 to 138304492 37 + TSS region transcription start site region 9160
Tssr9161 1 138304770 to 138304783 13 + TSS region transcription start site region 9161
Gm28500 1 138377264 to 138377414 150 + pseudogene predicted gene 28500
Nek7 1 138483837 to 138619757 135920 - protein coding gene NIMA (never in mitosis gene a)-related expressed kinase 7
Tssr14033 1 138484887 to 138484904 17 - TSS region transcription start site region 14033
Tssr14034 1 138485321 to 138485326 5 - TSS region transcription start site region 14034
Tssr14035 1 138494174 to 138494200 26 - TSS region transcription start site region 14035
Gm28501 1 138515615 to 138550009 34394 + antisense lncRNA gene predicted gene 28501
Tssr14036 1 138536201 to 138536205 4 - TSS region transcription start site region 14036
Gm37080 1 138552305 to 138554708 2403 - unclassified gene predicted gene, 37080
Gm37101 1 138567697 to 138571356 3659 - unclassified gene predicted gene, 37101
Tssr14037 1 138582313 to 138582325 12 - TSS region transcription start site region 14037
Tssr14038 1 138582370 to 138582379 9 - TSS region transcription start site region 14038
Tssr14039 1 138598929 to 138598932 3 - TSS region transcription start site region 14039
Tssr14040 1 138606580 to 138606609 29 - TSS region transcription start site region 14040
Tssr14041 1 138614413 to 138614424 11 - TSS region transcription start site region 14041
Cpgi823 1 138619028 to 138619961 933 CpG island CpG island 823
Tssr14042 1 138619199 to 138619207 8 - TSS region transcription start site region 14042
Tssr14043 1 138619645 to 138619654 9 - TSS region transcription start site region 14043
Tssr14044 1 138619665 to 138619683 18 - TSS region transcription start site region 14044
Tssr14045 1 138619687 to 138619759 72 - TSS region transcription start site region 14045
Tssr14046 1 138620214 to 138620227 13 - TSS region transcription start site region 14046
Gm5833 1 138640095 to 138682075 41980 - lincRNA gene predicted gene 5833
Gm8790 1 138689524 to 138689845 321 - pseudogene predicted gene 8790
Lhx9 1 138825186 to 138848577 23391 - protein coding gene LIM homeobox protein 9
Cpgi824 1 138831439 to 138831658 219 CpG island CpG island 824
Cpgi825 1 138838331 to 138838671 340 CpG island CpG island 825
Cpgi826 1 138839899 to 138840250 351 CpG island CpG island 826
Cpgi827 1 138841482 to 138842051 569 CpG island CpG island 827
Tssr14047 1 138842437 to 138842455 18 - TSS region transcription start site region 14047