Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:136637510-136877609

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr9079 1 136638578 to 136638584 6 + TSS region transcription start site region 9079
Gm34056 1 136650442 to 136662730 12288 - lncRNA gene predicted gene, 34056
Gm41958 1 136662099 to 136682575 20476 + protein coding gene predicted gene, 41958
Tssr9080 1 136662146 to 136662159 13 + TSS region transcription start site region 9080
Cpgi816 1 136670504 to 136670733 229 CpG island CpG island 816
Tssr9081 1 136674690 to 136674699 9 + TSS region transcription start site region 9081
Tssr13946 1 136674768 to 136674830 62 - TSS region transcription start site region 13946
Tssr9082 1 136676413 to 136676443 30 + TSS region transcription start site region 9082
Tssr9083 1 136677162 to 136677214 52 + TSS region transcription start site region 9083
Tssr9084 1 136677244 to 136677249 5 + TSS region transcription start site region 9084
Tssr9085 1 136678140 to 136678154 14 + TSS region transcription start site region 9085
Tssr9086 1 136678158 to 136678181 23 + TSS region transcription start site region 9086
Tssr9087 1 136680456 to 136680476 20 + TSS region transcription start site region 9087
Tssr9088 1 136683375 to 136683410 35 + TSS region transcription start site region 9088
Gm19705 1 136683396 to 136690805 7409 + lincRNA gene predicted gene, 19705
Tssr9089 1 136683661 to 136683670 9 + TSS region transcription start site region 9089
Tssr231 1 136685228 to 136685252 24 - TSS region transcription start site region 231
Tssr9090 1 136690530 to 136690534 4 + TSS region transcription start site region 9090
Tssr9091 1 136692852 to 136692859 7 + TSS region transcription start site region 9091
Tssr9092 1 136696198 to 136696213 15 + TSS region transcription start site region 9092
Platr22 1 136696211 to 136725728 29517 + lincRNA gene pluripotency associated transcript 22
Tssr9093 1 136696260 to 136696271 11 + TSS region transcription start site region 9093
Tssr9094 1 136696402 to 136696414 12 + TSS region transcription start site region 9094
Gm24086 1 136697374 to 136697471 97 + snRNA gene predicted gene, 24086
Tssr9095 1 136699650 to 136699659 9 + TSS region transcription start site region 9095
D1Mit538 1 136757191 to 136757339 148 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 538
Gm22132 1 136757510 to 136757609 99 - miRNA gene predicted gene, 22132
Cpgi817 1 136781709 to 136782031 322 CpG island CpG island 817
Cpgi818 1 136789088 to 136789682 594 CpG island CpG island 818
Gm8762 1 136789182 to 136789520 338 - pseudogene predicted gene 8762
Tssr13947 1 136789572 to 136789573 1 - TSS region transcription start site region 13947
Gm29718 1 136793034 to 136793510 476 + pseudogene predicted gene, 29718
Gm17781 1 136798311 to 136798959 648 - pseudogene predicted gene, 17781
Nr5a2 1 136842571 to 136960448 117877 - protein coding gene nuclear receptor subfamily 5, group A, member 2