MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:13663467-14133470

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr5969	1	13668739 to 13668772	33	+	TSS region	transcription start site region 5969
Xkr9	1	13668771 to 13701723	32952	+	protein coding gene	X-linked Kx blood group related 9
Tssr5970	1	13668773 to 13668794	21	+	TSS region	transcription start site region 5970
Tssr5971	1	13668799 to 13668812	13	+	TSS region	transcription start site region 5971
Tssr5972	1	13669001 to 13669040	39	+	TSS region	transcription start site region 5972
Tssr11011	1	13669788 to 13669792	4	-	TSS region	transcription start site region 11011
Gm26273	1	13774334 to 13774464	130	-	snoRNA gene	predicted gene, 26273
Gm2452	1	13774628 to 13775938	1310	-	pseudogene	predicted gene 2452
Gm5523	1	13785883 to 13786879	996	-	pseudogene	predicted pseudogene 5523
Tssr11012	1	13827532 to 13827540	8	-	TSS region	transcription start site region 11012
Gm31195	1	13846500 to 13881933	35433	+	lncRNA gene	predicted gene, 31195
Tssr5973	1	13846590 to 13846618	28	+	TSS region	transcription start site region 5973
Gm36947	1	13846871 to 13849119	2248	-	unclassified gene	predicted gene, 36947
Tssr5974	1	13874369 to 13874377	8	+	TSS region	transcription start site region 5974
Tssr11013	1	13898467 to 13898470	3	-	TSS region	transcription start site region 11013
Gm19122	1	13916903 to 13917754	851	+	pseudogene	predicted gene, 19122
Gm25491	1	13932378 to 13932685	307	+	unclassified non-coding RNA gene	predicted gene, 25491
Gm39596	1	14042254 to 14141388	99134	+	lncRNA gene	predicted gene, 39596
Gm37400	1	14109215 to 14112819	3604	-	unclassified gene	predicted gene, 37400