Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:13561483-13722748

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tram1 1 13564698 to 13589910 25212 - protein coding gene translocating chain-associating membrane protein 1
Tssr11000 1 13565232 to 13565274 42 - TSS region transcription start site region 11000
Tssr11001 1 13565939 to 13565957 18 - TSS region transcription start site region 11001
Tssr11002 1 13566097 to 13566178 81 - TSS region transcription start site region 11002
Tssr11003 1 13587825 to 13587830 5 - TSS region transcription start site region 11003
Tssr11004 1 13588975 to 13588977 2 - TSS region transcription start site region 11004
Cpgi43 1 13589083 to 13590328 1245 CpG island CpG island 43
Tssr11005 1 13589717 to 13589904 187 - TSS region transcription start site region 11005
Tssr5968 1 13593595 to 13593611 16 + TSS region transcription start site region 5968
Lactb2 1 13625898 to 13660605 34707 - protein coding gene lactamase, beta 2
Tssr11006 1 13626205 to 13626210 5 - TSS region transcription start site region 11006
Gm38319 1 13641483 to 13642748 1265 - unclassified gene predicted gene, 38319
Cpgi44 1 13660064 to 13660774 710 CpG island CpG island 44
Tssr11007 1 13660454 to 13660469 15 - TSS region transcription start site region 11007
Tssr11008 1 13660476 to 13660554 78 - TSS region transcription start site region 11008
Tssr11009 1 13660639 to 13660650 11 - TSS region transcription start site region 11009
Tssr11010 1 13660745 to 13660755 10 - TSS region transcription start site region 11010
Tssr5969 1 13668739 to 13668772 33 + TSS region transcription start site region 5969
Xkr9 1 13668771 to 13701723 32952 + protein coding gene X-linked Kx blood group related 9
Tssr5970 1 13668773 to 13668794 21 + TSS region transcription start site region 5970
Tssr5971 1 13668799 to 13668812 13 + TSS region transcription start site region 5971
Tssr5972 1 13669001 to 13669040 39 + TSS region transcription start site region 5972
Tssr11011 1 13669788 to 13669792 4 - TSS region transcription start site region 11011