Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:134726620-135006628

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syt2 1 134646564 to 134753149 106585 + protein coding gene synaptotagmin II
Cpgi777 1 134747439 to 134747857 418 CpG island CpG island 777
Ppp1r12b 1 134754658 to 134955942 201284 - protein coding gene protein phosphatase 1, regulatory subunit 12B
Tssr13799 1 134773263 to 134773268 5 - TSS region transcription start site region 13799
Gm32670 1 134773486 to 134805865 32379 + lncRNA gene predicted gene, 32670
Tssr13800 1 134784701 to 134784748 47 - TSS region transcription start site region 13800
Gm37949 1 134799895 to 134801985 2090 - unclassified gene predicted gene, 37949
Tssr13801 1 134802713 to 134802718 5 - TSS region transcription start site region 13801
Tssr13802 1 134803423 to 134803434 11 - TSS region transcription start site region 13802
Tssr13803 1 134803715 to 134803726 11 - TSS region transcription start site region 13803
Tssr13804 1 134803742 to 134803753 11 - TSS region transcription start site region 13804
Tssr13805 1 134803780 to 134803863 83 - TSS region transcription start site region 13805
Gm22232 1 134809275 to 134809368 93 + miRNA gene predicted gene, 22232
Gm37677 1 134819916 to 134827549 7633 - unclassified gene predicted gene, 37677
Gm28892 1 134834142 to 134846415 12273 + antisense lncRNA gene predicted gene 28892
Tssr13806 1 134846768 to 134846779 11 - TSS region transcription start site region 13806
Tssr13807 1 134866555 to 134866566 11 - TSS region transcription start site region 13807
Tssr13808 1 134866567 to 134866577 10 - TSS region transcription start site region 13808
Tssr13809 1 134866620 to 134866628 8 - TSS region transcription start site region 13809
Cpgi778 1 134955242 to 134956150 908 CpG island CpG island 778
Tssr13810 1 134955842 to 134955843 1 - TSS region transcription start site region 13810
Tssr13811 1 134955847 to 134955852 5 - TSS region transcription start site region 13811
Tssr13812 1 134955877 to 134955891 14 - TSS region transcription start site region 13812
Tssr13813 1 134955908 to 134955955 47 - TSS region transcription start site region 13813
Cpgi779 1 134962115 to 134962851 736 CpG island CpG island 779
Tssr8922 1 134962553 to 134962568 15 + TSS region transcription start site region 8922
Ube2t 1 134962565 to 134974162 11597 + protein coding gene ubiquitin-conjugating enzyme E2T
Tssr8923 1 134962571 to 134962627 56 + TSS region transcription start site region 8923
Tssr8924 1 134962631 to 134962642 11 + TSS region transcription start site region 8924
Lgr6 1 134983301 to 135105276 121975 - protein coding gene leucine-rich repeat-containing G protein-coupled receptor 6
Tssr13814 1 134985018 to 134985025 7 - TSS region transcription start site region 13814
Cpgi780 1 134987254 to 134988280 1026 CpG island CpG island 780
Tssr8925 1 134987786 to 134987797 11 + TSS region transcription start site region 8925