Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:134654658-135055942

39 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Syt2	1	134646564 to 134753149	106585	+	protein coding gene	synaptotagmin II
Cpgi775	1	134708792 to 134709683	891		CpG island	CpG island 775
Tssr8918	1	134709259 to 134709289	30	+	TSS region	transcription start site region 8918
Tssr8919	1	134709293 to 134709318	25	+	TSS region	transcription start site region 8919
Tssr8920	1	134709361 to 134709369	8	+	TSS region	transcription start site region 8920
Cpgi776	1	134709963 to 134710345	382		CpG island	CpG island 776
Tssr8921	1	134723414 to 134723418	4	+	TSS region	transcription start site region 8921
Cpgi777	1	134747439 to 134747857	418		CpG island	CpG island 777
Ppp1r12b	1	134754658 to 134955942	201284	-	protein coding gene	protein phosphatase 1, regulatory subunit 12B
Tssr13799	1	134773263 to 134773268	5	-	TSS region	transcription start site region 13799
Gm32670	1	134773486 to 134805865	32379	+	lncRNA gene	predicted gene, 32670
Tssr13800	1	134784701 to 134784748	47	-	TSS region	transcription start site region 13800
Gm37949	1	134799895 to 134801985	2090	-	unclassified gene	predicted gene, 37949
Tssr13801	1	134802713 to 134802718	5	-	TSS region	transcription start site region 13801
Tssr13802	1	134803423 to 134803434	11	-	TSS region	transcription start site region 13802
Tssr13803	1	134803715 to 134803726	11	-	TSS region	transcription start site region 13803
Tssr13804	1	134803742 to 134803753	11	-	TSS region	transcription start site region 13804
Tssr13805	1	134803780 to 134803863	83	-	TSS region	transcription start site region 13805
Gm22232	1	134809275 to 134809368	93	+	miRNA gene	predicted gene, 22232
Gm37677	1	134819916 to 134827549	7633	-	unclassified gene	predicted gene, 37677
Gm28892	1	134834142 to 134846415	12273	+	antisense lncRNA gene	predicted gene 28892
Tssr13806	1	134846768 to 134846779	11	-	TSS region	transcription start site region 13806
Tssr13807	1	134866555 to 134866566	11	-	TSS region	transcription start site region 13807
Tssr13808	1	134866567 to 134866577	10	-	TSS region	transcription start site region 13808
Tssr13809	1	134866620 to 134866628	8	-	TSS region	transcription start site region 13809
Cpgi778	1	134955242 to 134956150	908		CpG island	CpG island 778
Tssr13810	1	134955842 to 134955843	1	-	TSS region	transcription start site region 13810
Tssr13811	1	134955847 to 134955852	5	-	TSS region	transcription start site region 13811
Tssr13812	1	134955877 to 134955891	14	-	TSS region	transcription start site region 13812
Tssr13813	1	134955908 to 134955955	47	-	TSS region	transcription start site region 13813
Cpgi779	1	134962115 to 134962851	736		CpG island	CpG island 779
Tssr8922	1	134962553 to 134962568	15	+	TSS region	transcription start site region 8922
Ube2t	1	134962565 to 134974162	11597	+	protein coding gene	ubiquitin-conjugating enzyme E2T
Tssr8923	1	134962571 to 134962627	56	+	TSS region	transcription start site region 8923
Tssr8924	1	134962631 to 134962642	11	+	TSS region	transcription start site region 8924
Lgr6	1	134983301 to 135105276	121975	-	protein coding gene	leucine-rich repeat-containing G protein-coupled receptor 6
Tssr13814	1	134985018 to 134985025	7	-	TSS region	transcription start site region 13814
Cpgi780	1	134987254 to 134988280	1026		CpG island	CpG island 780
Tssr8925	1	134987786 to 134987797	11	+	TSS region	transcription start site region 8925