Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:134628263-134918268

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kdm5b 1 134560178 to 134632878 72700 + protein coding gene lysine (K)-specific demethylase 5B
Tssr8911 1 134632129 to 134632133 4 + TSS region transcription start site region 8911
Gm26783 1 134642254 to 134646520 4266 - lincRNA gene predicted gene, 26783
Cpgi774 1 134646226 to 134647450 1224 CpG island CpG island 774
Tssr8912 1 134646551 to 134646561 10 + TSS region transcription start site region 8912
Syt2 1 134646564 to 134753149 106585 + protein coding gene synaptotagmin II
Tssr8913 1 134646570 to 134646587 17 + TSS region transcription start site region 8913
Tssr8914 1 134646602 to 134646686 84 + TSS region transcription start site region 8914
Tssr8915 1 134646701 to 134646711 10 + TSS region transcription start site region 8915
Tssr8916 1 134646747 to 134646758 11 + TSS region transcription start site region 8916
Tssr8917 1 134646769 to 134646776 7 + TSS region transcription start site region 8917
Cpgi775 1 134708792 to 134709683 891 CpG island CpG island 775
Tssr8918 1 134709259 to 134709289 30 + TSS region transcription start site region 8918
Tssr8919 1 134709293 to 134709318 25 + TSS region transcription start site region 8919
Tssr8920 1 134709361 to 134709369 8 + TSS region transcription start site region 8920
Cpgi776 1 134709963 to 134710345 382 CpG island CpG island 776
Tssr8921 1 134723414 to 134723418 4 + TSS region transcription start site region 8921
Cpgi777 1 134747439 to 134747857 418 CpG island CpG island 777
Ppp1r12b 1 134754658 to 134955942 201284 - protein coding gene protein phosphatase 1, regulatory subunit 12B
Tssr13799 1 134773263 to 134773268 5 - TSS region transcription start site region 13799
Gm32670 1 134773486 to 134805865 32379 + lncRNA gene predicted gene, 32670
Tssr13800 1 134784701 to 134784748 47 - TSS region transcription start site region 13800
Gm37949 1 134799895 to 134801985 2090 - unclassified gene predicted gene, 37949
Tssr13801 1 134802713 to 134802718 5 - TSS region transcription start site region 13801
Tssr13802 1 134803423 to 134803434 11 - TSS region transcription start site region 13802
Tssr13803 1 134803715 to 134803726 11 - TSS region transcription start site region 13803
Tssr13804 1 134803742 to 134803753 11 - TSS region transcription start site region 13804
Tssr13805 1 134803780 to 134803863 83 - TSS region transcription start site region 13805
Gm22232 1 134809275 to 134809368 93 + miRNA gene predicted gene, 22232
Gm37677 1 134819916 to 134827549 7633 - unclassified gene predicted gene, 37677
Gm28892 1 134834142 to 134846415 12273 + antisense lncRNA gene predicted gene 28892
Tssr13806 1 134846768 to 134846779 11 - TSS region transcription start site region 13806
Tssr13807 1 134866555 to 134866566 11 - TSS region transcription start site region 13807
Tssr13808 1 134866567 to 134866577 10 - TSS region transcription start site region 13808
Tssr13809 1 134866620 to 134866628 8 - TSS region transcription start site region 13809