Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:134617306-136127332

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345 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kdm5b 1 134560178 to 134632878 72700 + protein coding gene lysine (K)-specific demethylase 5B
Tssr8911 1 134632129 to 134632133 4 + TSS region transcription start site region 8911
Gm26783 1 134642254 to 134646520 4266 - lincRNA gene predicted gene, 26783
Cpgi774 1 134646226 to 134647450 1224 CpG island CpG island 774
Tssr8912 1 134646551 to 134646561 10 + TSS region transcription start site region 8912
Syt2 1 134646564 to 134753149 106585 + protein coding gene synaptotagmin II
Tssr8913 1 134646570 to 134646587 17 + TSS region transcription start site region 8913
Tssr8914 1 134646602 to 134646686 84 + TSS region transcription start site region 8914
Tssr8915 1 134646701 to 134646711 10 + TSS region transcription start site region 8915
Tssr8916 1 134646747 to 134646758 11 + TSS region transcription start site region 8916
Tssr8917 1 134646769 to 134646776 7 + TSS region transcription start site region 8917
Cpgi775 1 134708792 to 134709683 891 CpG island CpG island 775
Tssr8918 1 134709259 to 134709289 30 + TSS region transcription start site region 8918
Tssr8919 1 134709293 to 134709318 25 + TSS region transcription start site region 8919
Tssr8920 1 134709361 to 134709369 8 + TSS region transcription start site region 8920
Cpgi776 1 134709963 to 134710345 382 CpG island CpG island 776
Tssr8921 1 134723414 to 134723418 4 + TSS region transcription start site region 8921
Cpgi777 1 134747439 to 134747857 418 CpG island CpG island 777
Ppp1r12b 1 134754658 to 134955942 201284 - protein coding gene protein phosphatase 1, regulatory subunit 12B
Tssr13799 1 134773263 to 134773268 5 - TSS region transcription start site region 13799
Gm32670 1 134773486 to 134805865 32379 + lncRNA gene predicted gene, 32670
Tssr13800 1 134784701 to 134784748 47 - TSS region transcription start site region 13800
Gm37949 1 134799895 to 134801985 2090 - unclassified gene predicted gene, 37949
Tssr13801 1 134802713 to 134802718 5 - TSS region transcription start site region 13801
Tssr13802 1 134803423 to 134803434 11 - TSS region transcription start site region 13802
Tssr13803 1 134803715 to 134803726 11 - TSS region transcription start site region 13803
Tssr13804 1 134803742 to 134803753 11 - TSS region transcription start site region 13804
Tssr13805 1 134803780 to 134803863 83 - TSS region transcription start site region 13805
Gm22232 1 134809275 to 134809368 93 + miRNA gene predicted gene, 22232
Gm37677 1 134819916 to 134827549 7633 - unclassified gene predicted gene, 37677
Gm28892 1 134834142 to 134846415 12273 + antisense lncRNA gene predicted gene 28892
Tssr13806 1 134846768 to 134846779 11 - TSS region transcription start site region 13806
Tssr13807 1 134866555 to 134866566 11 - TSS region transcription start site region 13807
Tssr13808 1 134866567 to 134866577 10 - TSS region transcription start site region 13808
Tssr13809 1 134866620 to 134866628 8 - TSS region transcription start site region 13809
Cpgi778 1 134955242 to 134956150 908 CpG island CpG island 778
Tssr13810 1 134955842 to 134955843 1 - TSS region transcription start site region 13810
Tssr13811 1 134955847 to 134955852 5 - TSS region transcription start site region 13811
Tssr13812 1 134955877 to 134955891 14 - TSS region transcription start site region 13812
Tssr13813 1 134955908 to 134955955 47 - TSS region transcription start site region 13813
Cpgi779 1 134962115 to 134962851 736 CpG island CpG island 779
Tssr8922 1 134962553 to 134962568 15 + TSS region transcription start site region 8922
Ube2t 1 134962565 to 134974162 11597 + protein coding gene ubiquitin-conjugating enzyme E2T
Tssr8923 1 134962571 to 134962627 56 + TSS region transcription start site region 8923
Tssr8924 1 134962631 to 134962642 11 + TSS region transcription start site region 8924
Lgr6 1 134983301 to 135105276 121975 - protein coding gene leucine-rich repeat-containing G protein-coupled receptor 6
Tssr13814 1 134985018 to 134985025 7 - TSS region transcription start site region 13814
Cpgi780 1 134987254 to 134988280 1026 CpG island CpG island 780
Tssr8925 1 134987786 to 134987797 11 + TSS region transcription start site region 8925
Cpgi781 1 135085338 to 135085645 307 CpG island CpG island 781
Cpgi782 1 135104721 to 135105589 868 CpG island CpG island 782
Tssr13815 1 135105159 to 135105170 11 - TSS region transcription start site region 13815
Tssr13816 1 135105179 to 135105207 28 - TSS region transcription start site region 13816
Tssr13817 1 135105210 to 135105225 15 - TSS region transcription start site region 13817
Tssr219 1 135105234 to 135105237 3 - TSS region transcription start site region 219
Tssr13818 1 135105333 to 135105349 16 - TSS region transcription start site region 13818
Tssr13819 1 135105351 to 135105362 11 - TSS region transcription start site region 13819
Ptprv 1 135108498 to 135132575 24077 - protein coding gene protein tyrosine phosphatase, receptor type, V
Tssr8926 1 135108928 to 135108947 19 + TSS region transcription start site region 8926
Tssr8927 1 135108955 to 135108967 12 + TSS region transcription start site region 8927
Gm10535 1 135108961 to 135113378 4417 + antisense lncRNA gene predicted gene 10535
Tssr13820 1 135129202 to 135129215 13 - TSS region transcription start site region 13820
Tssr13821 1 135131155 to 135131164 9 - TSS region transcription start site region 13821
Tssr8928 1 135131240 to 135131258 18 + TSS region transcription start site region 8928
Tssr8929 1 135131273 to 135131306 33 + TSS region transcription start site region 8929
Tssr13822 1 135131747 to 135131755 8 - TSS region transcription start site region 13822
Tssr8930 1 135131809 to 135131859 50 + TSS region transcription start site region 8930
Tssr13823 1 135132543 to 135132554 11 - TSS region transcription start site region 13823
Tssr13824 1 135132560 to 135132601 41 - TSS region transcription start site region 13824
Tssr8931 1 135132693 to 135132741 48 + TSS region transcription start site region 8931
Ptpn7 1 135132700 to 135145317 12617 + protein coding gene protein tyrosine phosphatase, non-receptor type 7
Tssr13825 1 135133193 to 135133226 33 - TSS region transcription start site region 13825
Tssr8932 1 135133258 to 135133269 11 + TSS region transcription start site region 8932
Tssr8933 1 135133272 to 135133319 47 + TSS region transcription start site region 8933
Tssr8934 1 135133853 to 135133885 32 + TSS region transcription start site region 8934
Tssr8935 1 135142668 to 135142671 3 + TSS region transcription start site region 8935
Tssr8936 1 135144328 to 135144353 25 + TSS region transcription start site region 8936
Tssr8937 1 135144575 to 135144593 18 + TSS region transcription start site region 8937
Tssr8938 1 135144607 to 135144664 57 + TSS region transcription start site region 8938
Tssr8939 1 135144684 to 135144706 22 + TSS region transcription start site region 8939
Cpgi783 1 135146396 to 135147917 1521 CpG island CpG island 783
Tssr8940 1 135146707 to 135146718 11 + TSS region transcription start site region 8940
Tssr8941 1 135146734 to 135146745 11 + TSS region transcription start site region 8941
Tssr8942 1 135146782 to 135146871 89 + TSS region transcription start site region 8942
Arl8a 1 135146834 to 135156268 9434 + protein coding gene ADP-ribosylation factor-like 8A
Tssr8943 1 135147615 to 135147626 11 + TSS region transcription start site region 8943
Tssr8944 1 135147629 to 135147668 39 + TSS region transcription start site region 8944
Gm26280 1 135150666 to 135150766 100 - rRNA gene predicted gene, 26280
Tssr8945 1 135152800 to 135152836 36 + TSS region transcription start site region 8945
Gm15445 1 135152963 to 135153806 843 + antisense lncRNA gene predicted gene 15445
Tssr8946 1 135154401 to 135154451 50 + TSS region transcription start site region 8946
Tssr8947 1 135154624 to 135154640 16 + TSS region transcription start site region 8947
Tssr8948 1 135154641 to 135154686 45 + TSS region transcription start site region 8948
Tssr8949 1 135155292 to 135155304 12 + TSS region transcription start site region 8949
Tssr8950 1 135155310 to 135155335 25 + TSS region transcription start site region 8950
Tssr13826 1 135155320 to 135155340 20 - TSS region transcription start site region 13826
Tssr8951 1 135155375 to 135155430 55 + TSS region transcription start site region 8951
Tssr220 1 135155451 to 135155462 11 + TSS region transcription start site region 220
Tssr8952 1 135155466 to 135155481 15 + TSS region transcription start site region 8952
Tssr8953 1 135155565 to 135155577 12 + TSS region transcription start site region 8953
Gpr37l1 1 135160250 to 135167681 7431 - protein coding gene G protein-coupled receptor 37-like 1
Tssr13827 1 135160773 to 135160782 9 - TSS region transcription start site region 13827
Cpgi784 1 135161007 to 135161343 336 CpG island CpG island 784
Tssr13828 1 135167538 to 135167554 16 - TSS region transcription start site region 13828
Tssr13829 1 135167567 to 135167587 20 - TSS region transcription start site region 13829
Tssr221 1 135167592 to 135167593 1 - TSS region transcription start site region 221
Tssr13830 1 135167606 to 135167629 23 - TSS region transcription start site region 13830
D1Mit445.2 1 135171829 to 135171968 139 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 445.2
D1Mit445 1 135171982 to 135172078 96 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 445
Exq2 1 135171982 to 135172078 96 QTL exploratory and excitability QTL 2
Tssr13831 1 135180886 to 135180894 8 - TSS region transcription start site region 13831
Gm41955 1 135190594 to 135202076 11482 - lncRNA gene predicted gene, 41955
Tssr8954 1 135231984 to 135232002 18 + TSS region transcription start site region 8954
Gm4204 1 135231995 to 135233225 1230 + pseudogene predicted gene 4204
Tssr8955 1 135232077 to 135232110 33 + TSS region transcription start site region 8955
Tssr8956 1 135232536 to 135232559 23 + TSS region transcription start site region 8956
Tssr8957 1 135232877 to 135232899 22 + TSS region transcription start site region 8957
Gm26642 1 135248561 to 135266443 17882 + antisense lncRNA gene predicted gene, 26642
Elf3 1 135253574 to 135258565 4991 - protein coding gene E74-like factor 3
Tssr13832 1 135257698 to 135257709 11 - TSS region transcription start site region 13832
Cpgi785 1 135258352 to 135258546 194 CpG island CpG island 785
Tssr13833 1 135258449 to 135258465 16 - TSS region transcription start site region 13833
Cpgi786 1 135259104 to 135259277 173 CpG island CpG island 786
Rnpep 1 135262712 to 135284084 21372 - protein coding gene arginyl aminopeptidase (aminopeptidase B)
Tssr13834 1 135265346 to 135265377 31 - TSS region transcription start site region 13834
Tssr13835 1 135271565 to 135271599 34 - TSS region transcription start site region 13835
Tssr13836 1 135277942 to 135277946 4 - TSS region transcription start site region 13836
Cpgi787 1 135283207 to 135284387 1180 CpG island CpG island 787
Tssr13837 1 135284006 to 135284066 60 - TSS region transcription start site region 13837
Tssr13838 1 135284075 to 135284086 11 - TSS region transcription start site region 13838
Gm19642 1 135286954 to 135287428 474 + pseudogene predicted gene, 19642
Timm17a 1 135301535 to 135313737 12202 - protein coding gene translocase of inner mitochondrial membrane 17a
Cpgi788 1 135313299 to 135314055 756 CpG island CpG island 788
Tssr13839 1 135313729 to 135313760 31 - TSS region transcription start site region 13839
Gm41956 1 135321757 to 135324666 2909 - lncRNA gene predicted gene, 41956
Tssr8958 1 135324770 to 135324820 50 + TSS region transcription start site region 8958
Lmod1 1 135324813 to 135368065 43252 + protein coding gene leiomodin 1 (smooth muscle)
Tssr8959 1 135324822 to 135324856 34 + TSS region transcription start site region 8959
Gm22796 1 135353717 to 135353822 105 - snRNA gene predicted gene, 22796
Tssr8960 1 135363857 to 135363868 11 + TSS region transcription start site region 8960
Cpgi789 1 135368344 to 135368819 475 CpG island CpG island 789
Shisa4 1 135371057 to 135375237 4180 - protein coding gene shisa family member 4
Tssr13840 1 135371884 to 135371888 4 - TSS region transcription start site region 13840
Tssr13841 1 135372306 to 135372332 26 - TSS region transcription start site region 13841
Tssr13842 1 135373199 to 135373210 11 - TSS region transcription start site region 13842
Tssr13843 1 135373409 to 135373421 12 - TSS region transcription start site region 13843
Tssr13844 1 135373427 to 135373455 28 - TSS region transcription start site region 13844
Tssr13845 1 135373468 to 135373483 15 - TSS region transcription start site region 13845
Tssr13846 1 135373958 to 135373964 6 - TSS region transcription start site region 13846
Tssr13847 1 135374419 to 135374434 15 - TSS region transcription start site region 13847
Cpgi790 1 135374436 to 135375476 1040 CpG island CpG island 790
Tssr13848 1 135374919 to 135374933 14 - TSS region transcription start site region 13848
Tssr13849 1 135374936 to 135374946 10 - TSS region transcription start site region 13849
Tssr13850 1 135374955 to 135375098 143 - TSS region transcription start site region 13850
Tssr13851 1 135375099 to 135375110 11 - TSS region transcription start site region 13851
Tssr13852 1 135375223 to 135375228 5 - TSS region transcription start site region 13852
Tssr13853 1 135375233 to 135375245 12 - TSS region transcription start site region 13853
Tssr13854 1 135375250 to 135375264 14 - TSS region transcription start site region 13854
Tssr13855 1 135375268 to 135375277 9 - TSS region transcription start site region 13855
Tssr13856 1 135375282 to 135375285 3 - TSS region transcription start site region 13856
Ipo9 1 135382315 to 135430491 48176 - protein coding gene importin 9
Gm28277 1 135409622 to 135414186 4564 - sense intronic lncRNA gene predicted gene 28277
Cpgi791 1 135429715 to 135430870 1155 CpG island CpG island 791
Tssr13857 1 135430427 to 135430488 61 - TSS region transcription start site region 13857
Tssr13858 1 135430490 to 135430505 15 - TSS region transcription start site region 13858
Nav1 1 135434580 to 135607295 172715 - protein coding gene neuron navigator 1
Tssr13859 1 135441354 to 135441376 22 - TSS region transcription start site region 13859
Tssr13860 1 135441479 to 135441495 16 - TSS region transcription start site region 13860
Mir1231 1 135454603 to 135454683 80 - miRNA gene microRNA 1231
Tssr13861 1 135470703 to 135470720 17 - TSS region transcription start site region 13861
Tssr13862 1 135470762 to 135470780 18 - TSS region transcription start site region 13862
Tssr13863 1 135479955 to 135479969 14 - TSS region transcription start site region 13863
2610012C04Rik 1 135480392 to 135481414 1022 - unclassified gene RIKEN cDNA 2610012C04 gene
Tssr13864 1 135495524 to 135495527 3 - TSS region transcription start site region 13864
Cpgi792 1 135510151 to 135511031 880 CpG island CpG island 792
Tssr13865 1 135510375 to 135510388 13 - TSS region transcription start site region 13865
Tssr13866 1 135510393 to 135510407 14 - TSS region transcription start site region 13866
Gm32940 1 135511866 to 135532367 20501 + lncRNA gene predicted gene, 32940
Gm37333 1 135523088 to 135525338 2250 - unclassified gene predicted gene, 37333
Tssr13867 1 135564552 to 135564557 5 - TSS region transcription start site region 13867
Cpgi793 1 135584577 to 135585946 1369 CpG island CpG island 793
Gm4793 1 135584773 to 135599948 15175 + antisense lncRNA gene predicted gene 4793
Tssr13868 1 135585281 to 135585292 11 - TSS region transcription start site region 13868
Tssr13869 1 135585308 to 135585313 5 - TSS region transcription start site region 13869
Tssr13870 1 135585314 to 135585364 50 - TSS region transcription start site region 13870
Tssr13871 1 135585367 to 135585380 13 - TSS region transcription start site region 13871
Tssr13872 1 135585488 to 135585516 28 - TSS region transcription start site region 13872
Tssr13873 1 135585517 to 135585546 29 - TSS region transcription start site region 13873
Tssr13874 1 135585708 to 135585719 11 - TSS region transcription start site region 13874
Tssr13875 1 135585731 to 135585817 86 - TSS region transcription start site region 13875
Tssr13876 1 135603216 to 135603223 7 - TSS region transcription start site region 13876
Tssr13877 1 135603243 to 135603261 18 - TSS region transcription start site region 13877
Gm38399 1 135606447 to 135688105 81658 - lincRNA gene predicted gene, 38399
Tssr13878 1 135607548 to 135607561 13 - TSS region transcription start site region 13878
Tssr13879 1 135631219 to 135631224 5 - TSS region transcription start site region 13879
Tssr8961 1 135631749 to 135631773 24 + TSS region transcription start site region 8961
Tssr13880 1 135634040 to 135634051 11 - TSS region transcription start site region 13880
Tssr13881 1 135660264 to 135660277 13 - TSS region transcription start site region 13881
Tssr8962 1 135673718 to 135673738 20 + TSS region transcription start site region 8962
Tssr13882 1 135679234 to 135679264 30 - TSS region transcription start site region 13882