Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:134436987-134677002

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Platr1 1 134435628 to 134439597 3969 + lincRNA gene pluripotency associated transcript 1
Gm37935 1 134454492 to 134455473 981 - unclassified gene predicted gene, 37935
Cpgi769 1 134455151 to 134455875 724 CpG island CpG island 769
Klhl12 1 134455496 to 134490880 35384 + protein coding gene kelch-like 12
Tssr8896 1 134455509 to 134455523 14 + TSS region transcription start site region 8896
Tssr8897 1 134455524 to 134455564 40 + TSS region transcription start site region 8897
Tssr8898 1 134481191 to 134481195 4 + TSS region transcription start site region 8898
Cpgi770 1 134494496 to 134495114 618 CpG island CpG island 770
Tssr8899 1 134494628 to 134494679 51 + TSS region transcription start site region 8899
Rabif 1 134494660 to 134507885 13225 + protein coding gene RAB interacting factor
Tssr8900 1 134494736 to 134494763 27 + TSS region transcription start site region 8900
Tssr8901 1 134494986 to 134495016 30 + TSS region transcription start site region 8901
Gm25612 1 134505338 to 134505463 125 + snoRNA gene predicted gene, 25612
Cpgi771 1 134513220 to 134513897 677 CpG island CpG island 771
Gm15454 1 134518081 to 134518563 482 + pseudogene predicted gene 15454
Gm29376 1 134519978 to 134524139 4161 + pseudogene predicted gene 29376
Gm46159 1 134527918 to 134532609 4691 + lncRNA gene predicted gene, 46159
Tssr13795 1 134540717 to 134540725 8 - TSS region transcription start site region 13795
Tssr8902 1 134540822 to 134540839 17 + TSS region transcription start site region 8902
Tssr8903 1 134540846 to 134540862 16 + TSS region transcription start site region 8903
Mgat4e 1 134540941 to 134549682 8741 - protein coding gene MGAT4 family, member E
Gm46160 1 134546864 to 134547540 676 + lncRNA gene predicted gene, 46160
Tssr13796 1 134549609 to 134549616 7 - TSS region transcription start site region 13796
Tssr13797 1 134549663 to 134549687 24 - TSS region transcription start site region 13797
Cpgi772 1 134556173 to 134557060 887 CpG island CpG island 772
Tssr13798 1 134556987 to 134557002 15 - TSS region transcription start site region 13798
Cpgi773 1 134559886 to 134561599 1713 CpG island CpG island 773
Tssr8904 1 134560157 to 134560180 23 + TSS region transcription start site region 8904
Kdm5b 1 134560178 to 134632878 72700 + protein coding gene lysine (K)-specific demethylase 5B
Tssr8905 1 134560190 to 134560213 23 + TSS region transcription start site region 8905
Tssr8906 1 134560214 to 134560233 19 + TSS region transcription start site region 8906
Tssr8907 1 134574470 to 134574474 4 + TSS region transcription start site region 8907
Tssr8908 1 134575358 to 134575362 4 + TSS region transcription start site region 8908
Tssr8909 1 134576420 to 134576424 4 + TSS region transcription start site region 8909
Tssr8910 1 134613326 to 134613356 30 + TSS region transcription start site region 8910
Tssr8911 1 134632129 to 134632133 4 + TSS region transcription start site region 8911
Gm26783 1 134642254 to 134646520 4266 - lincRNA gene predicted gene, 26783
Cpgi774 1 134646226 to 134647450 1224 CpG island CpG island 774
Tssr8912 1 134646551 to 134646561 10 + TSS region transcription start site region 8912
Syt2 1 134646564 to 134753149 106585 + protein coding gene synaptotagmin II
Tssr8913 1 134646570 to 134646587 17 + TSS region transcription start site region 8913
Tssr8914 1 134646602 to 134646686 84 + TSS region transcription start site region 8914
Tssr8915 1 134646701 to 134646711 10 + TSS region transcription start site region 8915
Tssr8916 1 134646747 to 134646758 11 + TSS region transcription start site region 8916
Tssr8917 1 134646769 to 134646776 7 + TSS region transcription start site region 8917