Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:134311338-134412302

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppfia4 1 134296783 to 134332928 36145 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Tssr8873 1 134325544 to 134325551 7 + TSS region transcription start site region 8873
Tssr13789 1 134326947 to 134326956 9 - TSS region transcription start site region 13789
Tssr13790 1 134326964 to 134326992 28 - TSS region transcription start site region 13790
Cpgi765 1 134344136 to 134344944 808 CpG island CpG island 765
Tssr13791 1 134344657 to 134344729 72 - TSS region transcription start site region 13791
Tmem183a 1 134346097 to 134361979 15882 - protein coding gene transmembrane protein 183A
Cpgi766 1 134361338 to 134362302 964 CpG island CpG island 766
Tssr13792 1 134361933 to 134361998 65 - TSS region transcription start site region 13792
Tssr8874 1 134385938 to 134385943 5 + TSS region transcription start site region 8874
4933406M09Rik 1 134385940 to 134390981 5041 + protein coding gene RIKEN cDNA 4933406M09 gene
Cyb5r1 1 134405561 to 134411740 6179 + protein coding gene cytochrome b5 reductase 1
Tssr13793 1 134405630 to 134405635 5 - TSS region transcription start site region 13793
Tssr8875 1 134405702 to 134405724 22 + TSS region transcription start site region 8875
Tssr8876 1 134405725 to 134405736 11 + TSS region transcription start site region 8876
Tssr8877 1 134405768 to 134405792 24 + TSS region transcription start site region 8877
Tssr8878 1 134405802 to 134405813 11 + TSS region transcription start site region 8878
Cpgi767 1 134405846 to 134406405 559 CpG island CpG island 767
Tssr217 1 134405965 to 134405970 5 + TSS region transcription start site region 217
Tssr8879 1 134405984 to 134406005 21 + TSS region transcription start site region 8879
Tssr8880 1 134406017 to 134406029 12 + TSS region transcription start site region 8880
Tssr218 1 134406051 to 134406062 11 + TSS region transcription start site region 218
Tssr8881 1 134406315 to 134406326 11 + TSS region transcription start site region 8881
Tssr8882 1 134406334 to 134406357 23 + TSS region transcription start site region 8882
Tssr8883 1 134406374 to 134406385 11 + TSS region transcription start site region 8883
Tssr8884 1 134408086 to 134408129 43 + TSS region transcription start site region 8884