Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:134154765-134454782

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46158 1 134177233 to 134182086 4853 - lncRNA gene predicted gene, 46158
Tssr8858 1 134182150 to 134182177 27 + TSS region transcription start site region 8858
Chil1 1 134182170 to 134190031 7861 + protein coding gene chitinase-like 1
Tssr8859 1 134182456 to 134182477 21 + TSS region transcription start site region 8859
Tssr8860 1 134183334 to 134183358 24 + TSS region transcription start site region 8860
Tssr8861 1 134183478 to 134183487 9 + TSS region transcription start site region 8861
Tssr8862 1 134183541 to 134183562 21 + TSS region transcription start site region 8862
Tssr13778 1 134183654 to 134183667 13 - TSS region transcription start site region 13778
Tssr8863 1 134189125 to 134189146 21 + TSS region transcription start site region 8863
Tssr8864 1 134189721 to 134189732 11 + TSS region transcription start site region 8864
Tssr8865 1 134189833 to 134189849 16 + TSS region transcription start site region 8865
Tssr8866 1 134193432 to 134193445 13 + TSS region transcription start site region 8866
Mybph 1 134193448 to 134201232 7784 + protein coding gene myosin binding protein H
Adora1 1 134199223 to 134235431 36208 - protein coding gene adenosine A1 receptor
Cpgi762 1 134234173 to 134235932 1759 CpG island CpG island 762
Tssr13779 1 134234492 to 134234523 31 - TSS region transcription start site region 13779
Tssr13780 1 134234835 to 134234880 45 - TSS region transcription start site region 13780
Tssr13781 1 134234885 to 134234896 11 - TSS region transcription start site region 13781
Tssr13782 1 134234903 to 134234912 9 - TSS region transcription start site region 13782
Tssr13783 1 134234982 to 134235001 19 - TSS region transcription start site region 13783
Tssr13784 1 134235141 to 134235152 11 - TSS region transcription start site region 13784
Tssr13785 1 134235203 to 134235217 14 - TSS region transcription start site region 13785
Tssr13786 1 134235420 to 134235443 23 - TSS region transcription start site region 13786
Cpgi763 1 134244177 to 134244432 255 CpG island CpG island 763
Tssr8867 1 134270355 to 134270366 11 + TSS region transcription start site region 8867
Gm32221 1 134272054 to 134276472 4418 - lncRNA gene predicted gene, 32221
Tssr8868 1 134276604 to 134276606 2 + TSS region transcription start site region 8868
Gm24517 1 134280885 to 134280991 106 - snRNA gene predicted gene, 24517
D1Mit140 1 134289365 to 134289505 140 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 140
Tssr8869 1 134289968 to 134289977 9 + TSS region transcription start site region 8869
Tssr8870 1 134289997 to 134290015 18 + TSS region transcription start site region 8870
Myog 1 134290004 to 134292548 2544 + protein coding gene myogenin
Tssr8871 1 134290022 to 134290031 9 + TSS region transcription start site region 8871
Ppfia4 1 134296783 to 134332928 36145 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Cpgi764 1 134298409 to 134299669 1260 CpG island CpG island 764
Gm32267 1 134299453 to 134304279 4826 + lncRNA gene predicted gene, 32267
Tssr8872 1 134302973 to 134302999 26 + TSS region transcription start site region 8872
Tssr13787 1 134304765 to 134304782 17 - TSS region transcription start site region 13787
Tssr13788 1 134304823 to 134304848 25 - TSS region transcription start site region 13788
Tssr8873 1 134325544 to 134325551 7 + TSS region transcription start site region 8873
Tssr13789 1 134326947 to 134326956 9 - TSS region transcription start site region 13789
Tssr13790 1 134326964 to 134326992 28 - TSS region transcription start site region 13790
Cpgi765 1 134344136 to 134344944 808 CpG island CpG island 765
Tssr13791 1 134344657 to 134344729 72 - TSS region transcription start site region 13791
Tmem183a 1 134346097 to 134361979 15882 - protein coding gene transmembrane protein 183A
Cpgi766 1 134361338 to 134362302 964 CpG island CpG island 766
Tssr13792 1 134361933 to 134361998 65 - TSS region transcription start site region 13792
Tssr8874 1 134385938 to 134385943 5 + TSS region transcription start site region 8874
4933406M09Rik 1 134385940 to 134390981 5041 + protein coding gene RIKEN cDNA 4933406M09 gene
Cyb5r1 1 134405561 to 134411740 6179 + protein coding gene cytochrome b5 reductase 1
Tssr13793 1 134405630 to 134405635 5 - TSS region transcription start site region 13793
Tssr8875 1 134405702 to 134405724 22 + TSS region transcription start site region 8875
Tssr8876 1 134405725 to 134405736 11 + TSS region transcription start site region 8876
Tssr8877 1 134405768 to 134405792 24 + TSS region transcription start site region 8877
Tssr8878 1 134405802 to 134405813 11 + TSS region transcription start site region 8878
Cpgi767 1 134405846 to 134406405 559 CpG island CpG island 767
Tssr217 1 134405965 to 134405970 5 + TSS region transcription start site region 217
Tssr8879 1 134405984 to 134406005 21 + TSS region transcription start site region 8879
Tssr8880 1 134406017 to 134406029 12 + TSS region transcription start site region 8880
Tssr218 1 134406051 to 134406062 11 + TSS region transcription start site region 218
Tssr8881 1 134406315 to 134406326 11 + TSS region transcription start site region 8881
Tssr8882 1 134406334 to 134406357 23 + TSS region transcription start site region 8882
Tssr8883 1 134406374 to 134406385 11 + TSS region transcription start site region 8883
Tssr8884 1 134408086 to 134408129 43 + TSS region transcription start site region 8884
Cpgi768 1 134415040 to 134416078 1038 CpG island CpG island 768
Tssr13794 1 134415251 to 134415287 36 - TSS region transcription start site region 13794
Adipor1 1 134415378 to 134433351 17973 + protein coding gene adiponectin receptor 1
Tssr8885 1 134415388 to 134415395 7 + TSS region transcription start site region 8885
Tssr8886 1 134415396 to 134415408 12 + TSS region transcription start site region 8886
Tssr8887 1 134415414 to 134415504 90 + TSS region transcription start site region 8887
Tssr8888 1 134415510 to 134415534 24 + TSS region transcription start site region 8888
Tssr8889 1 134415710 to 134415785 75 + TSS region transcription start site region 8889
Tssr8890 1 134423995 to 134424027 32 + TSS region transcription start site region 8890
Tssr8891 1 134424755 to 134424775 20 + TSS region transcription start site region 8891
Tssr8892 1 134428115 to 134428155 40 + TSS region transcription start site region 8892
Tssr8893 1 134431147 to 134431211 64 + TSS region transcription start site region 8893
Tssr8894 1 134431995 to 134432024 29 + TSS region transcription start site region 8894
Tssr8895 1 134432198 to 134432209 11 + TSS region transcription start site region 8895
Platr1 1 134435628 to 134439597 3969 + lincRNA gene pluripotency associated transcript 1
Gm37935 1 134454492 to 134455473 981 - unclassified gene predicted gene, 37935