Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:134052170-134320031

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm19497 1 134060040 to 134061004 964 - lncRNA gene predicted gene, 19497
Tssr13763 1 134060811 to 134060815 4 - TSS region transcription start site region 13763
Tssr13764 1 134060862 to 134060873 11 - TSS region transcription start site region 13764
Tssr13765 1 134060910 to 134060959 49 - TSS region transcription start site region 13765
Cpgi758 1 134060918 to 134061439 521 CpG island CpG island 758
Tssr8846 1 134061072 to 134061090 18 + TSS region transcription start site region 8846
Tssr8847 1 134061095 to 134061107 12 + TSS region transcription start site region 8847
Tssr8848 1 134061136 to 134061150 14 + TSS region transcription start site region 8848
Cpgi759 1 134063127 to 134063396 269 CpG island CpG island 759
Tssr13766 1 134063282 to 134063298 16 - TSS region transcription start site region 13766
Tssr13767 1 134063315 to 134063331 16 - TSS region transcription start site region 13767
Tssr13768 1 134063355 to 134063365 10 - TSS region transcription start site region 13768
Tssr13769 1 134063366 to 134063372 6 - TSS region transcription start site region 13769
Tssr8849 1 134063453 to 134063460 7 + TSS region transcription start site region 8849
Tssr8850 1 134063520 to 134063531 11 + TSS region transcription start site region 8850
Tssr8851 1 134066413 to 134066416 3 + TSS region transcription start site region 8851
Btg2 1 134075170 to 134079120 3950 - protein coding gene B cell translocation gene 2, anti-proliferative
Tssr8852 1 134077846 to 134077849 3 + TSS region transcription start site region 8852
Cpgi760 1 134078713 to 134079598 885 CpG island CpG island 760
Tssr13770 1 134079114 to 134079119 5 - TSS region transcription start site region 13770
Gm31974 1 134082456 to 134084610 2154 + lncRNA gene predicted gene, 31974
Tssr8853 1 134083253 to 134083277 24 + TSS region transcription start site region 8853
Gm32039 1 134090820 to 134095176 4356 - lncRNA gene predicted gene, 32039
Cpgi761 1 134092815 to 134093561 746 CpG island CpG island 761
Tssr8854 1 134093281 to 134093304 23 + TSS region transcription start site region 8854
Tssr13771 1 134093903 to 134093927 24 - TSS region transcription start site region 13771
Gm38140 1 134096405 to 134099159 2754 - unclassified gene predicted gene, 38140
Tssr13772 1 134099120 to 134099129 9 - TSS region transcription start site region 13772
Tssr13773 1 134099138 to 134099145 7 - TSS region transcription start site region 13773
Tssr13774 1 134099149 to 134099160 11 - TSS region transcription start site region 13774
Tssr13775 1 134099193 to 134099204 11 - TSS region transcription start site region 13775
Tssr13776 1 134099254 to 134099294 40 - TSS region transcription start site region 13776
Tssr8855 1 134099437 to 134099483 46 + TSS region transcription start site region 8855
Tssr13777 1 134105845 to 134105861 16 - TSS region transcription start site region 13777
Tssr8856 1 134109336 to 134109343 7 + TSS region transcription start site region 8856
Gm8618 1 134109368 to 134109799 431 + pseudogene predicted gene 8618
Tssr8857 1 134111233 to 134111248 15 + TSS region transcription start site region 8857
Chit1 1 134111242 to 134151540 40298 + protein coding gene chitinase 1 (chitotriosidase)
Gm46158 1 134177233 to 134182086 4853 - lncRNA gene predicted gene, 46158
Tssr8858 1 134182150 to 134182177 27 + TSS region transcription start site region 8858
Chil1 1 134182170 to 134190031 7861 + protein coding gene chitinase-like 1
Tssr8859 1 134182456 to 134182477 21 + TSS region transcription start site region 8859
Tssr8860 1 134183334 to 134183358 24 + TSS region transcription start site region 8860
Tssr8861 1 134183478 to 134183487 9 + TSS region transcription start site region 8861
Tssr8862 1 134183541 to 134183562 21 + TSS region transcription start site region 8862
Tssr13778 1 134183654 to 134183667 13 - TSS region transcription start site region 13778
Tssr8863 1 134189125 to 134189146 21 + TSS region transcription start site region 8863
Tssr8864 1 134189721 to 134189732 11 + TSS region transcription start site region 8864
Tssr8865 1 134189833 to 134189849 16 + TSS region transcription start site region 8865
Tssr8866 1 134193432 to 134193445 13 + TSS region transcription start site region 8866
Mybph 1 134193448 to 134201232 7784 + protein coding gene myosin binding protein H
Adora1 1 134199223 to 134235431 36208 - protein coding gene adenosine A1 receptor
Cpgi762 1 134234173 to 134235932 1759 CpG island CpG island 762
Tssr13779 1 134234492 to 134234523 31 - TSS region transcription start site region 13779
Tssr13780 1 134234835 to 134234880 45 - TSS region transcription start site region 13780
Tssr13781 1 134234885 to 134234896 11 - TSS region transcription start site region 13781
Tssr13782 1 134234903 to 134234912 9 - TSS region transcription start site region 13782
Tssr13783 1 134234982 to 134235001 19 - TSS region transcription start site region 13783
Tssr13784 1 134235141 to 134235152 11 - TSS region transcription start site region 13784
Tssr13785 1 134235203 to 134235217 14 - TSS region transcription start site region 13785
Tssr13786 1 134235420 to 134235443 23 - TSS region transcription start site region 13786
Cpgi763 1 134244177 to 134244432 255 CpG island CpG island 763
Tssr8867 1 134270355 to 134270366 11 + TSS region transcription start site region 8867
Gm32221 1 134272054 to 134276472 4418 - lncRNA gene predicted gene, 32221
Tssr8868 1 134276604 to 134276606 2 + TSS region transcription start site region 8868
Gm24517 1 134280885 to 134280991 106 - snRNA gene predicted gene, 24517
D1Mit140 1 134289365 to 134289505 140 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 140
Tssr8869 1 134289968 to 134289977 9 + TSS region transcription start site region 8869
Tssr8870 1 134289997 to 134290015 18 + TSS region transcription start site region 8870
Myog 1 134290004 to 134292548 2544 + protein coding gene myogenin
Tssr8871 1 134290022 to 134290031 9 + TSS region transcription start site region 8871
Ppfia4 1 134296783 to 134332928 36145 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Cpgi764 1 134298409 to 134299669 1260 CpG island CpG island 764
Gm32267 1 134299453 to 134304279 4826 + lncRNA gene predicted gene, 32267
Tssr8872 1 134302973 to 134302999 26 + TSS region transcription start site region 8872
Tssr13787 1 134304765 to 134304782 17 - TSS region transcription start site region 13787
Tssr13788 1 134304823 to 134304848 25 - TSS region transcription start site region 13788