Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:133969986-135020016

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225 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm1627 1 133962162 to 133971938 9776 + lincRNA gene predicted gene 1627
Bmncr 1 133977282 to 134006449 29167 + lncRNA gene bone marrow associated noncoding RNA
Tssr8828 1 133977479 to 133977490 11 + TSS region transcription start site region 8828
Gm18970 1 134032441 to 134033378 937 - pseudogene predicted gene, 18970
Tssr8829 1 134037463 to 134037484 21 + TSS region transcription start site region 8829
Tssr8830 1 134037490 to 134037530 40 + TSS region transcription start site region 8830
Fmod 1 134037515 to 134048277 10762 + protein coding gene fibromodulin
Tssr8831 1 134037534 to 134037552 18 + TSS region transcription start site region 8831
Tssr8832 1 134040228 to 134040239 11 + TSS region transcription start site region 8832
Tssr8833 1 134040252 to 134040262 10 + TSS region transcription start site region 8833
Tssr8834 1 134040274 to 134040279 5 + TSS region transcription start site region 8834
Tssr216 1 134040301 to 134040308 7 + TSS region transcription start site region 216
Tssr8835 1 134040325 to 134040331 6 + TSS region transcription start site region 8835
Tssr8836 1 134040339 to 134040360 21 + TSS region transcription start site region 8836
Tssr13761 1 134040360 to 134040385 25 - TSS region transcription start site region 13761
Tssr8837 1 134040372 to 134040382 10 + TSS region transcription start site region 8837
Tssr13762 1 134040389 to 134040398 9 - TSS region transcription start site region 13762
Tssr8838 1 134040400 to 134040406 6 + TSS region transcription start site region 8838
Tssr8839 1 134040419 to 134040430 11 + TSS region transcription start site region 8839
Tssr8840 1 134040460 to 134040480 20 + TSS region transcription start site region 8840
Tssr8841 1 134040738 to 134040754 16 + TSS region transcription start site region 8841
Tssr8842 1 134040814 to 134040838 24 + TSS region transcription start site region 8842
Tssr8843 1 134040869 to 134040895 26 + TSS region transcription start site region 8843
Tssr8844 1 134040929 to 134040940 11 + TSS region transcription start site region 8844
Cpgi757 1 134046472 to 134046758 286 CpG island CpG island 757
Tssr8845 1 134046678 to 134046698 20 + TSS region transcription start site region 8845
Gm19497 1 134060040 to 134061004 964 - lncRNA gene predicted gene, 19497
Tssr13763 1 134060811 to 134060815 4 - TSS region transcription start site region 13763
Tssr13764 1 134060862 to 134060873 11 - TSS region transcription start site region 13764
Tssr13765 1 134060910 to 134060959 49 - TSS region transcription start site region 13765
Cpgi758 1 134060918 to 134061439 521 CpG island CpG island 758
Tssr8846 1 134061072 to 134061090 18 + TSS region transcription start site region 8846
Tssr8847 1 134061095 to 134061107 12 + TSS region transcription start site region 8847
Tssr8848 1 134061136 to 134061150 14 + TSS region transcription start site region 8848
Cpgi759 1 134063127 to 134063396 269 CpG island CpG island 759
Tssr13766 1 134063282 to 134063298 16 - TSS region transcription start site region 13766
Tssr13767 1 134063315 to 134063331 16 - TSS region transcription start site region 13767
Tssr13768 1 134063355 to 134063365 10 - TSS region transcription start site region 13768
Tssr13769 1 134063366 to 134063372 6 - TSS region transcription start site region 13769
Tssr8849 1 134063453 to 134063460 7 + TSS region transcription start site region 8849
Tssr8850 1 134063520 to 134063531 11 + TSS region transcription start site region 8850
Tssr8851 1 134066413 to 134066416 3 + TSS region transcription start site region 8851
Btg2 1 134075170 to 134079120 3950 - protein coding gene B cell translocation gene 2, anti-proliferative
Tssr8852 1 134077846 to 134077849 3 + TSS region transcription start site region 8852
Cpgi760 1 134078713 to 134079598 885 CpG island CpG island 760
Tssr13770 1 134079114 to 134079119 5 - TSS region transcription start site region 13770
Gm31974 1 134082456 to 134084610 2154 + lncRNA gene predicted gene, 31974
Tssr8853 1 134083253 to 134083277 24 + TSS region transcription start site region 8853
Gm32039 1 134090820 to 134095176 4356 - lncRNA gene predicted gene, 32039
Cpgi761 1 134092815 to 134093561 746 CpG island CpG island 761
Tssr8854 1 134093281 to 134093304 23 + TSS region transcription start site region 8854
Tssr13771 1 134093903 to 134093927 24 - TSS region transcription start site region 13771
Gm38140 1 134096405 to 134099159 2754 - unclassified gene predicted gene, 38140
Tssr13772 1 134099120 to 134099129 9 - TSS region transcription start site region 13772
Tssr13773 1 134099138 to 134099145 7 - TSS region transcription start site region 13773
Tssr13774 1 134099149 to 134099160 11 - TSS region transcription start site region 13774
Tssr13775 1 134099193 to 134099204 11 - TSS region transcription start site region 13775
Tssr13776 1 134099254 to 134099294 40 - TSS region transcription start site region 13776
Tssr8855 1 134099437 to 134099483 46 + TSS region transcription start site region 8855
Tssr13777 1 134105845 to 134105861 16 - TSS region transcription start site region 13777
Tssr8856 1 134109336 to 134109343 7 + TSS region transcription start site region 8856
Gm8618 1 134109368 to 134109799 431 + pseudogene predicted gene 8618
Tssr8857 1 134111233 to 134111248 15 + TSS region transcription start site region 8857
Chit1 1 134111242 to 134151540 40298 + protein coding gene chitinase 1 (chitotriosidase)
Gm46158 1 134177233 to 134182086 4853 - lncRNA gene predicted gene, 46158
Tssr8858 1 134182150 to 134182177 27 + TSS region transcription start site region 8858
Chil1 1 134182170 to 134190031 7861 + protein coding gene chitinase-like 1
Tssr8859 1 134182456 to 134182477 21 + TSS region transcription start site region 8859
Tssr8860 1 134183334 to 134183358 24 + TSS region transcription start site region 8860
Tssr8861 1 134183478 to 134183487 9 + TSS region transcription start site region 8861
Tssr8862 1 134183541 to 134183562 21 + TSS region transcription start site region 8862
Tssr13778 1 134183654 to 134183667 13 - TSS region transcription start site region 13778
Tssr8863 1 134189125 to 134189146 21 + TSS region transcription start site region 8863
Tssr8864 1 134189721 to 134189732 11 + TSS region transcription start site region 8864
Tssr8865 1 134189833 to 134189849 16 + TSS region transcription start site region 8865
Tssr8866 1 134193432 to 134193445 13 + TSS region transcription start site region 8866
Mybph 1 134193448 to 134201232 7784 + protein coding gene myosin binding protein H
Adora1 1 134199223 to 134235431 36208 - protein coding gene adenosine A1 receptor
Cpgi762 1 134234173 to 134235932 1759 CpG island CpG island 762
Tssr13779 1 134234492 to 134234523 31 - TSS region transcription start site region 13779
Tssr13780 1 134234835 to 134234880 45 - TSS region transcription start site region 13780
Tssr13781 1 134234885 to 134234896 11 - TSS region transcription start site region 13781
Tssr13782 1 134234903 to 134234912 9 - TSS region transcription start site region 13782
Tssr13783 1 134234982 to 134235001 19 - TSS region transcription start site region 13783
Tssr13784 1 134235141 to 134235152 11 - TSS region transcription start site region 13784
Tssr13785 1 134235203 to 134235217 14 - TSS region transcription start site region 13785
Tssr13786 1 134235420 to 134235443 23 - TSS region transcription start site region 13786
Cpgi763 1 134244177 to 134244432 255 CpG island CpG island 763
Tssr8867 1 134270355 to 134270366 11 + TSS region transcription start site region 8867
Gm32221 1 134272054 to 134276472 4418 - lncRNA gene predicted gene, 32221
Tssr8868 1 134276604 to 134276606 2 + TSS region transcription start site region 8868
Gm24517 1 134280885 to 134280991 106 - snRNA gene predicted gene, 24517
D1Mit140 1 134289365 to 134289505 140 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 140
Tssr8869 1 134289968 to 134289977 9 + TSS region transcription start site region 8869
Tssr8870 1 134289997 to 134290015 18 + TSS region transcription start site region 8870
Myog 1 134290004 to 134292548 2544 + protein coding gene myogenin
Tssr8871 1 134290022 to 134290031 9 + TSS region transcription start site region 8871
Ppfia4 1 134296783 to 134332928 36145 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Cpgi764 1 134298409 to 134299669 1260 CpG island CpG island 764
Gm32267 1 134299453 to 134304279 4826 + lncRNA gene predicted gene, 32267
Tssr8872 1 134302973 to 134302999 26 + TSS region transcription start site region 8872
Tssr13787 1 134304765 to 134304782 17 - TSS region transcription start site region 13787
Tssr13788 1 134304823 to 134304848 25 - TSS region transcription start site region 13788
Tssr8873 1 134325544 to 134325551 7 + TSS region transcription start site region 8873
Tssr13789 1 134326947 to 134326956 9 - TSS region transcription start site region 13789
Tssr13790 1 134326964 to 134326992 28 - TSS region transcription start site region 13790
Cpgi765 1 134344136 to 134344944 808 CpG island CpG island 765
Tssr13791 1 134344657 to 134344729 72 - TSS region transcription start site region 13791
Tmem183a 1 134346097 to 134361979 15882 - protein coding gene transmembrane protein 183A
Cpgi766 1 134361338 to 134362302 964 CpG island CpG island 766
Tssr13792 1 134361933 to 134361998 65 - TSS region transcription start site region 13792
Tssr8874 1 134385938 to 134385943 5 + TSS region transcription start site region 8874
4933406M09Rik 1 134385940 to 134390981 5041 + protein coding gene RIKEN cDNA 4933406M09 gene
Cyb5r1 1 134405561 to 134411740 6179 + protein coding gene cytochrome b5 reductase 1
Tssr13793 1 134405630 to 134405635 5 - TSS region transcription start site region 13793
Tssr8875 1 134405702 to 134405724 22 + TSS region transcription start site region 8875
Tssr8876 1 134405725 to 134405736 11 + TSS region transcription start site region 8876
Tssr8877 1 134405768 to 134405792 24 + TSS region transcription start site region 8877
Tssr8878 1 134405802 to 134405813 11 + TSS region transcription start site region 8878
Cpgi767 1 134405846 to 134406405 559 CpG island CpG island 767
Tssr217 1 134405965 to 134405970 5 + TSS region transcription start site region 217
Tssr8879 1 134405984 to 134406005 21 + TSS region transcription start site region 8879
Tssr8880 1 134406017 to 134406029 12 + TSS region transcription start site region 8880
Tssr218 1 134406051 to 134406062 11 + TSS region transcription start site region 218
Tssr8881 1 134406315 to 134406326 11 + TSS region transcription start site region 8881
Tssr8882 1 134406334 to 134406357 23 + TSS region transcription start site region 8882
Tssr8883 1 134406374 to 134406385 11 + TSS region transcription start site region 8883
Tssr8884 1 134408086 to 134408129 43 + TSS region transcription start site region 8884
Cpgi768 1 134415040 to 134416078 1038 CpG island CpG island 768
Tssr13794 1 134415251 to 134415287 36 - TSS region transcription start site region 13794
Adipor1 1 134415378 to 134433351 17973 + protein coding gene adiponectin receptor 1
Tssr8885 1 134415388 to 134415395 7 + TSS region transcription start site region 8885
Tssr8886 1 134415396 to 134415408 12 + TSS region transcription start site region 8886
Tssr8887 1 134415414 to 134415504 90 + TSS region transcription start site region 8887
Tssr8888 1 134415510 to 134415534 24 + TSS region transcription start site region 8888
Tssr8889 1 134415710 to 134415785 75 + TSS region transcription start site region 8889
Tssr8890 1 134423995 to 134424027 32 + TSS region transcription start site region 8890
Tssr8891 1 134424755 to 134424775 20 + TSS region transcription start site region 8891
Tssr8892 1 134428115 to 134428155 40 + TSS region transcription start site region 8892
Tssr8893 1 134431147 to 134431211 64 + TSS region transcription start site region 8893
Tssr8894 1 134431995 to 134432024 29 + TSS region transcription start site region 8894
Tssr8895 1 134432198 to 134432209 11 + TSS region transcription start site region 8895
Platr1 1 134435628 to 134439597 3969 + lincRNA gene pluripotency associated transcript 1
Gm37935 1 134454492 to 134455473 981 - unclassified gene predicted gene, 37935
Cpgi769 1 134455151 to 134455875 724 CpG island CpG island 769
Klhl12 1 134455496 to 134490880 35384 + protein coding gene kelch-like 12
Tssr8896 1 134455509 to 134455523 14 + TSS region transcription start site region 8896
Tssr8897 1 134455524 to 134455564 40 + TSS region transcription start site region 8897
Tssr8898 1 134481191 to 134481195 4 + TSS region transcription start site region 8898
Cpgi770 1 134494496 to 134495114 618 CpG island CpG island 770
Tssr8899 1 134494628 to 134494679 51 + TSS region transcription start site region 8899
Rabif 1 134494660 to 134507885 13225 + protein coding gene RAB interacting factor
Tssr8900 1 134494736 to 134494763 27 + TSS region transcription start site region 8900
Tssr8901 1 134494986 to 134495016 30 + TSS region transcription start site region 8901
Gm25612 1 134505338 to 134505463 125 + snoRNA gene predicted gene, 25612
Cpgi771 1 134513220 to 134513897 677 CpG island CpG island 771
Gm15454 1 134518081 to 134518563 482 + pseudogene predicted gene 15454
Gm29376 1 134519978 to 134524139 4161 + pseudogene predicted gene 29376
Gm46159 1 134527918 to 134532609 4691 + lncRNA gene predicted gene, 46159
Tssr13795 1 134540717 to 134540725 8 - TSS region transcription start site region 13795
Tssr8902 1 134540822 to 134540839 17 + TSS region transcription start site region 8902
Tssr8903 1 134540846 to 134540862 16 + TSS region transcription start site region 8903
Mgat4e 1 134540941 to 134549682 8741 - protein coding gene MGAT4 family, member E
Gm46160 1 134546864 to 134547540 676 + lncRNA gene predicted gene, 46160
Tssr13796 1 134549609 to 134549616 7 - TSS region transcription start site region 13796
Tssr13797 1 134549663 to 134549687 24 - TSS region transcription start site region 13797
Cpgi772 1 134556173 to 134557060 887 CpG island CpG island 772
Tssr13798 1 134556987 to 134557002 15 - TSS region transcription start site region 13798
Cpgi773 1 134559886 to 134561599 1713 CpG island CpG island 773
Tssr8904 1 134560157 to 134560180 23 + TSS region transcription start site region 8904
Kdm5b 1 134560178 to 134632878 72700 + protein coding gene lysine (K)-specific demethylase 5B
Tssr8905 1 134560190 to 134560213 23 + TSS region transcription start site region 8905
Tssr8906 1 134560214 to 134560233 19 + TSS region transcription start site region 8906
Tssr8907 1 134574470 to 134574474 4 + TSS region transcription start site region 8907
Tssr8908 1 134575358 to 134575362 4 + TSS region transcription start site region 8908
Tssr8909 1 134576420 to 134576424 4 + TSS region transcription start site region 8909
Tssr8910 1 134613326 to 134613356 30 + TSS region transcription start site region 8910
Tssr8911 1 134632129 to 134632133 4 + TSS region transcription start site region 8911
Gm26783 1 134642254 to 134646520 4266 - lincRNA gene predicted gene, 26783
Cpgi774 1 134646226 to 134647450 1224 CpG island CpG island 774
Tssr8912 1 134646551 to 134646561 10 + TSS region transcription start site region 8912
Syt2 1 134646564 to 134753149 106585 + protein coding gene synaptotagmin II
Tssr8913 1 134646570 to 134646587 17 + TSS region transcription start site region 8913
Tssr8914 1 134646602 to 134646686 84 + TSS region transcription start site region 8914
Tssr8915 1 134646701 to 134646711 10 + TSS region transcription start site region 8915
Tssr8916 1 134646747 to 134646758 11 + TSS region transcription start site region 8916
Tssr8917 1 134646769 to 134646776 7 + TSS region transcription start site region 8917
Cpgi775 1 134708792 to 134709683 891 CpG island CpG island 775
Tssr8918 1 134709259 to 134709289 30 + TSS region transcription start site region 8918
Tssr8919 1 134709293 to 134709318 25 + TSS region transcription start site region 8919
Tssr8920 1 134709361 to 134709369 8 + TSS region transcription start site region 8920
Cpgi776 1 134709963 to 134710345 382 CpG island CpG island 776
Tssr8921 1 134723414 to 134723418 4 + TSS region transcription start site region 8921
Cpgi777 1 134747439 to 134747857 418 CpG island CpG island 777
Ppp1r12b 1 134754658 to 134955942 201284 - protein coding gene protein phosphatase 1, regulatory subunit 12B
Tssr13799 1 134773263 to 134773268 5 - TSS region transcription start site region 13799
Gm32670 1 134773486 to 134805865 32379 + lncRNA gene predicted gene, 32670
Tssr13800 1 134784701 to 134784748 47 - TSS region transcription start site region 13800
Gm37949 1 134799895 to 134801985 2090 - unclassified gene predicted gene, 37949
Tssr13801 1 134802713 to 134802718 5 - TSS region transcription start site region 13801