Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:133932456-134234610

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm1627 1 133962162 to 133971938 9776 + lincRNA gene predicted gene 1627
Bmncr 1 133977282 to 134006449 29167 + lncRNA gene bone marrow associated noncoding RNA
Tssr8828 1 133977479 to 133977490 11 + TSS region transcription start site region 8828
Gm18970 1 134032441 to 134033378 937 - pseudogene predicted gene, 18970
Tssr8829 1 134037463 to 134037484 21 + TSS region transcription start site region 8829
Tssr8830 1 134037490 to 134037530 40 + TSS region transcription start site region 8830
Fmod 1 134037515 to 134048277 10762 + protein coding gene fibromodulin
Tssr8831 1 134037534 to 134037552 18 + TSS region transcription start site region 8831
Tssr8832 1 134040228 to 134040239 11 + TSS region transcription start site region 8832
Tssr8833 1 134040252 to 134040262 10 + TSS region transcription start site region 8833
Tssr8834 1 134040274 to 134040279 5 + TSS region transcription start site region 8834
Tssr216 1 134040301 to 134040308 7 + TSS region transcription start site region 216
Tssr8835 1 134040325 to 134040331 6 + TSS region transcription start site region 8835
Tssr8836 1 134040339 to 134040360 21 + TSS region transcription start site region 8836
Tssr13761 1 134040360 to 134040385 25 - TSS region transcription start site region 13761
Tssr8837 1 134040372 to 134040382 10 + TSS region transcription start site region 8837
Tssr13762 1 134040389 to 134040398 9 - TSS region transcription start site region 13762
Tssr8838 1 134040400 to 134040406 6 + TSS region transcription start site region 8838
Tssr8839 1 134040419 to 134040430 11 + TSS region transcription start site region 8839
Tssr8840 1 134040460 to 134040480 20 + TSS region transcription start site region 8840
Tssr8841 1 134040738 to 134040754 16 + TSS region transcription start site region 8841
Tssr8842 1 134040814 to 134040838 24 + TSS region transcription start site region 8842
Tssr8843 1 134040869 to 134040895 26 + TSS region transcription start site region 8843
Tssr8844 1 134040929 to 134040940 11 + TSS region transcription start site region 8844
Cpgi757 1 134046472 to 134046758 286 CpG island CpG island 757
Tssr8845 1 134046678 to 134046698 20 + TSS region transcription start site region 8845
Gm19497 1 134060040 to 134061004 964 - lncRNA gene predicted gene, 19497
Tssr13763 1 134060811 to 134060815 4 - TSS region transcription start site region 13763
Tssr13764 1 134060862 to 134060873 11 - TSS region transcription start site region 13764
Tssr13765 1 134060910 to 134060959 49 - TSS region transcription start site region 13765
Cpgi758 1 134060918 to 134061439 521 CpG island CpG island 758
Tssr8846 1 134061072 to 134061090 18 + TSS region transcription start site region 8846
Tssr8847 1 134061095 to 134061107 12 + TSS region transcription start site region 8847
Tssr8848 1 134061136 to 134061150 14 + TSS region transcription start site region 8848
Cpgi759 1 134063127 to 134063396 269 CpG island CpG island 759
Tssr13766 1 134063282 to 134063298 16 - TSS region transcription start site region 13766
Tssr13767 1 134063315 to 134063331 16 - TSS region transcription start site region 13767
Tssr13768 1 134063355 to 134063365 10 - TSS region transcription start site region 13768
Tssr13769 1 134063366 to 134063372 6 - TSS region transcription start site region 13769
Tssr8849 1 134063453 to 134063460 7 + TSS region transcription start site region 8849
Tssr8850 1 134063520 to 134063531 11 + TSS region transcription start site region 8850
Tssr8851 1 134066413 to 134066416 3 + TSS region transcription start site region 8851
Btg2 1 134075170 to 134079120 3950 - protein coding gene B cell translocation gene 2, anti-proliferative
Tssr8852 1 134077846 to 134077849 3 + TSS region transcription start site region 8852
Cpgi760 1 134078713 to 134079598 885 CpG island CpG island 760
Tssr13770 1 134079114 to 134079119 5 - TSS region transcription start site region 13770
Gm31974 1 134082456 to 134084610 2154 + lncRNA gene predicted gene, 31974
Tssr8853 1 134083253 to 134083277 24 + TSS region transcription start site region 8853
Gm32039 1 134090820 to 134095176 4356 - lncRNA gene predicted gene, 32039
Cpgi761 1 134092815 to 134093561 746 CpG island CpG island 761
Tssr8854 1 134093281 to 134093304 23 + TSS region transcription start site region 8854
Tssr13771 1 134093903 to 134093927 24 - TSS region transcription start site region 13771
Gm38140 1 134096405 to 134099159 2754 - unclassified gene predicted gene, 38140
Tssr13772 1 134099120 to 134099129 9 - TSS region transcription start site region 13772
Tssr13773 1 134099138 to 134099145 7 - TSS region transcription start site region 13773
Tssr13774 1 134099149 to 134099160 11 - TSS region transcription start site region 13774
Tssr13775 1 134099193 to 134099204 11 - TSS region transcription start site region 13775
Tssr13776 1 134099254 to 134099294 40 - TSS region transcription start site region 13776
Tssr8855 1 134099437 to 134099483 46 + TSS region transcription start site region 8855
Tssr13777 1 134105845 to 134105861 16 - TSS region transcription start site region 13777
Tssr8856 1 134109336 to 134109343 7 + TSS region transcription start site region 8856
Gm8618 1 134109368 to 134109799 431 + pseudogene predicted gene 8618
Tssr8857 1 134111233 to 134111248 15 + TSS region transcription start site region 8857
Chit1 1 134111242 to 134151540 40298 + protein coding gene chitinase 1 (chitotriosidase)
Gm46158 1 134177233 to 134182086 4853 - lncRNA gene predicted gene, 46158
Tssr8858 1 134182150 to 134182177 27 + TSS region transcription start site region 8858
Chil1 1 134182170 to 134190031 7861 + protein coding gene chitinase-like 1
Tssr8859 1 134182456 to 134182477 21 + TSS region transcription start site region 8859
Tssr8860 1 134183334 to 134183358 24 + TSS region transcription start site region 8860
Tssr8861 1 134183478 to 134183487 9 + TSS region transcription start site region 8861
Tssr8862 1 134183541 to 134183562 21 + TSS region transcription start site region 8862
Tssr13778 1 134183654 to 134183667 13 - TSS region transcription start site region 13778
Tssr8863 1 134189125 to 134189146 21 + TSS region transcription start site region 8863
Tssr8864 1 134189721 to 134189732 11 + TSS region transcription start site region 8864
Tssr8865 1 134189833 to 134189849 16 + TSS region transcription start site region 8865
Tssr8866 1 134193432 to 134193445 13 + TSS region transcription start site region 8866
Mybph 1 134193448 to 134201232 7784 + protein coding gene myosin binding protein H
Adora1 1 134199223 to 134235431 36208 - protein coding gene adenosine A1 receptor
Cpgi762 1 134234173 to 134235932 1759 CpG island CpG island 762
Tssr13779 1 134234492 to 134234523 31 - TSS region transcription start site region 13779