Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:133897479-134057490

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Optc 1 133897199 to 133907999 10800 - protein coding gene opticin
Tssr13719 1 133899152 to 133899173 21 - TSS region transcription start site region 13719
Tssr13720 1 133899188 to 133899214 26 - TSS region transcription start site region 13720
Tssr13721 1 133899215 to 133899250 35 - TSS region transcription start site region 13721
Gm15851 1 133906531 to 133914822 8291 + antisense lncRNA gene predicted gene 15851
Tssr13722 1 133906954 to 133906960 6 - TSS region transcription start site region 13722
Tssr13723 1 133906973 to 133907014 41 - TSS region transcription start site region 13723
Tssr13724 1 133907053 to 133907062 9 - TSS region transcription start site region 13724
Cpgi756 1 133908416 to 133909100 684 CpG island CpG island 756
Prelp 1 133910304 to 133921414 11110 - protein coding gene proline arginine-rich end leucine-rich repeat
Tssr13725 1 133911035 to 133911049 14 - TSS region transcription start site region 13725
Tssr13726 1 133911496 to 133911508 12 - TSS region transcription start site region 13726
Tssr13727 1 133912321 to 133912343 22 - TSS region transcription start site region 13727
Tssr13728 1 133912426 to 133912449 23 - TSS region transcription start site region 13728
Tssr13729 1 133912535 to 133912547 12 - TSS region transcription start site region 13729
Tssr13730 1 133914621 to 133914631 10 - TSS region transcription start site region 13730
Tssr8827 1 133914637 to 133914669 32 + TSS region transcription start site region 8827
Tssr13731 1 133914697 to 133914717 20 - TSS region transcription start site region 13731
Tssr13732 1 133914736 to 133914742 6 - TSS region transcription start site region 13732
Tssr13733 1 133914752 to 133914766 14 - TSS region transcription start site region 13733
Tssr13734 1 133914770 to 133914781 11 - TSS region transcription start site region 13734
Tssr13735 1 133914789 to 133914798 9 - TSS region transcription start site region 13735
Tssr13736 1 133914829 to 133914838 9 - TSS region transcription start site region 13736
Tssr13737 1 133914876 to 133914886 10 - TSS region transcription start site region 13737
Tssr13738 1 133914919 to 133914924 5 - TSS region transcription start site region 13738
Tssr13739 1 133914970 to 133914982 12 - TSS region transcription start site region 13739
Tssr13740 1 133915018 to 133915042 24 - TSS region transcription start site region 13740
Tssr13741 1 133915115 to 133915133 18 - TSS region transcription start site region 13741
Tssr13742 1 133915168 to 133915198 30 - TSS region transcription start site region 13742
Tssr13743 1 133915216 to 133915265 49 - TSS region transcription start site region 13743
Tssr13744 1 133915290 to 133915295 5 - TSS region transcription start site region 13744
Tssr13745 1 133915305 to 133915323 18 - TSS region transcription start site region 13745
Tssr215 1 133915378 to 133915383 5 - TSS region transcription start site region 215
Tssr13746 1 133915392 to 133915405 13 - TSS region transcription start site region 13746
Tssr13747 1 133915414 to 133915421 7 - TSS region transcription start site region 13747
Tssr13748 1 133921346 to 133921357 11 - TSS region transcription start site region 13748
Tssr13749 1 133921361 to 133921392 31 - TSS region transcription start site region 13749
Tssr13750 1 133921393 to 133921409 16 - TSS region transcription start site region 13750
Tssr13751 1 133928694 to 133928701 7 - TSS region transcription start site region 13751
Tssr13752 1 133929891 to 133929904 13 - TSS region transcription start site region 13752
Tssr13753 1 133930025 to 133930038 13 - TSS region transcription start site region 13753
Tssr13754 1 133930044 to 133930047 3 - TSS region transcription start site region 13754
Tssr13755 1 133930050 to 133930072 22 - TSS region transcription start site region 13755
Tssr13756 1 133930074 to 133930092 18 - TSS region transcription start site region 13756
Tssr13757 1 133930111 to 133930126 15 - TSS region transcription start site region 13757
Tssr13758 1 133930132 to 133930146 14 - TSS region transcription start site region 13758
Tssr13759 1 133930169 to 133930178 9 - TSS region transcription start site region 13759
Tssr13760 1 133930179 to 133930184 5 - TSS region transcription start site region 13760
Gm1627 1 133962162 to 133971938 9776 + lincRNA gene predicted gene 1627
Bmncr 1 133977282 to 134006449 29167 + lncRNA gene bone marrow associated noncoding RNA
Tssr8828 1 133977479 to 133977490 11 + TSS region transcription start site region 8828
Gm18970 1 134032441 to 134033378 937 - pseudogene predicted gene, 18970
Tssr8829 1 134037463 to 134037484 21 + TSS region transcription start site region 8829
Tssr8830 1 134037490 to 134037530 40 + TSS region transcription start site region 8830
Fmod 1 134037515 to 134048277 10762 + protein coding gene fibromodulin
Tssr8831 1 134037534 to 134037552 18 + TSS region transcription start site region 8831
Tssr8832 1 134040228 to 134040239 11 + TSS region transcription start site region 8832
Tssr8833 1 134040252 to 134040262 10 + TSS region transcription start site region 8833
Tssr8834 1 134040274 to 134040279 5 + TSS region transcription start site region 8834
Tssr216 1 134040301 to 134040308 7 + TSS region transcription start site region 216
Tssr8835 1 134040325 to 134040331 6 + TSS region transcription start site region 8835
Tssr8836 1 134040339 to 134040360 21 + TSS region transcription start site region 8836
Tssr13761 1 134040360 to 134040385 25 - TSS region transcription start site region 13761
Tssr8837 1 134040372 to 134040382 10 + TSS region transcription start site region 8837
Tssr13762 1 134040389 to 134040398 9 - TSS region transcription start site region 13762
Tssr8838 1 134040400 to 134040406 6 + TSS region transcription start site region 8838
Tssr8839 1 134040419 to 134040430 11 + TSS region transcription start site region 8839
Tssr8840 1 134040460 to 134040480 20 + TSS region transcription start site region 8840
Tssr8841 1 134040738 to 134040754 16 + TSS region transcription start site region 8841
Tssr8842 1 134040814 to 134040838 24 + TSS region transcription start site region 8842
Tssr8843 1 134040869 to 134040895 26 + TSS region transcription start site region 8843
Tssr8844 1 134040929 to 134040940 11 + TSS region transcription start site region 8844
Cpgi757 1 134046472 to 134046758 286 CpG island CpG island 757
Tssr8845 1 134046678 to 134046698 20 + TSS region transcription start site region 8845