Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:13372554-13442408

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ncoa2	1	13139105 to 13374083	234978	-	protein coding gene	nuclear receptor coactivator 2
Cpgi41	1	13372212 to 13374892	2680		CpG island	CpG island 41
Tssr5965	1	13372916 to 13372918	2	+	TSS region	transcription start site region 5965
Tssr10990	1	13373642 to 13373664	22	-	TSS region	transcription start site region 10990
Tssr10991	1	13373879 to 13373891	12	-	TSS region	transcription start site region 10991
Tssr10992	1	13374027 to 13374069	42	-	TSS region	transcription start site region 10992
Tssr10993	1	13374072 to 13374075	3	-	TSS region	transcription start site region 10993
Tssr10994	1	13374121 to 13374182	61	-	TSS region	transcription start site region 10994
Tssr10995	1	13374220 to 13374263	43	-	TSS region	transcription start site region 10995
Tssr10996	1	13374396 to 13374411	15	-	TSS region	transcription start site region 10996
Tssr10997	1	13374432 to 13374475	43	-	TSS region	transcription start site region 10997
Gm29570	1	13376070 to 13388413	12343	+	antisense lncRNA gene	predicted gene 29570
Tssr5966	1	13388828 to 13388854	26	+	TSS region	transcription start site region 5966
Gm39595	1	13392554 to 13422408	29854	-	lncRNA gene	predicted gene, 39595
Gm7593	1	13407012 to 13407655	643	-	pseudogene	predicted gene 7593
Tssr10998	1	13426804 to 13426814	10	-	TSS region	transcription start site region 10998
Tssr10999	1	13426839 to 13426850	11	-	TSS region	transcription start site region 10999
Tssr5967	1	13436490 to 13436494	4	+	TSS region	transcription start site region 5967
Gm39600	1	13436514 to 13436800	286	+	pseudogene	predicted gene, 39600