Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:133700975-133900986

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp2b4 1 133702674 to 133801038 98364 - protein coding gene ATPase, Ca++ transporting, plasma membrane 4
Tssr13708 1 133719112 to 133719116 4 - TSS region transcription start site region 13708
Mir6903 1 133726558 to 133726645 87 - miRNA gene microRNA 6903
Cpgi753 1 133736231 to 133736405 174 CpG island CpG island 753
Tssr13709 1 133736365 to 133736414 49 - TSS region transcription start site region 13709
Tssr13710 1 133737986 to 133737990 4 - TSS region transcription start site region 13710
Tssr13711 1 133753486 to 133753535 49 - TSS region transcription start site region 13711
Tssr13712 1 133753838 to 133753857 19 - TSS region transcription start site region 13712
Tssr8824 1 133754893 to 133754895 2 + TSS region transcription start site region 8824
Gm37368 1 133775210 to 133778421 3211 - unclassified gene predicted gene, 37368
Cpgi754 1 133800674 to 133800897 223 CpG island CpG island 754
Tssr13713 1 133800964 to 133800973 9 - TSS region transcription start site region 13713
Tssr13714 1 133800975 to 133800986 11 - TSS region transcription start site region 13714
Tssr13715 1 133800996 to 133801023 27 - TSS region transcription start site region 13715
Tssr13716 1 133801031 to 133801038 7 - TSS region transcription start site region 13716
Cpgi755 1 133801050 to 133801228 178 CpG island CpG island 755
Tssr13717 1 133801057 to 133801066 9 - TSS region transcription start site region 13717
Tssr13718 1 133801183 to 133801185 2 - TSS region transcription start site region 13718
Tssr214 1 133801491 to 133801495 4 + TSS region transcription start site region 214
Gm10537 1 133829528 to 133831225 1697 + protein coding gene predicted gene 10537
Gm41954 1 133832595 to 133845212 12617 - lncRNA gene predicted gene, 41954
Gm28441 1 133835189 to 133838372 3183 + lincRNA gene predicted gene 28441
Gm31515 1 133859697 to 133891066 31369 + lncRNA gene predicted gene, 31515
Tssr8825 1 133880917 to 133880926 9 + TSS region transcription start site region 8825
Tssr8826 1 133880942 to 133880947 5 + TSS region transcription start site region 8826
Optc 1 133897199 to 133907999 10800 - protein coding gene opticin
Tssr13719 1 133899152 to 133899173 21 - TSS region transcription start site region 13719
Tssr13720 1 133899188 to 133899214 26 - TSS region transcription start site region 13720
Tssr13721 1 133899215 to 133899250 35 - TSS region transcription start site region 13721