Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:133595445-133745464

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23939 1 133601223 to 133601355 132 + snoRNA gene predicted gene, 23939
Snrpe 1 133603871 to 133610280 6409 - protein coding gene small nuclear ribonucleoprotein E
Cpgi750 1 133609695 to 133610513 818 CpG island CpG island 750
Tssr13692 1 133610242 to 133610245 3 - TSS region transcription start site region 13692
Tssr13693 1 133610253 to 133610294 41 - TSS region transcription start site region 13693
Tssr8817 1 133610397 to 133610417 20 + TSS region transcription start site region 8817
Gm26706 1 133610411 to 133614422 4011 + lincRNA gene predicted gene, 26706
Zc3h11a 1 133619868 to 133661399 41531 - protein coding gene zinc finger CCCH type containing 11A
Gm38394 1 133619940 to 133661318 41378 - protein coding gene predicted gene, 38394
Tssr13694 1 133648878 to 133648883 5 - TSS region transcription start site region 13694
Tssr13695 1 133655159 to 133655169 10 - TSS region transcription start site region 13695
Zbed6 1 133655879 to 133660885 5006 - protein coding gene zinc finger, BED type containing 6
Cpgi751 1 133660477 to 133660726 249 CpG island CpG island 751
Tssr13696 1 133660806 to 133660818 12 - TSS region transcription start site region 13696
Tssr13697 1 133660823 to 133660844 21 - TSS region transcription start site region 13697
Cpgi752 1 133660873 to 133661562 689 CpG island CpG island 752
Tssr13698 1 133660949 to 133660974 25 - TSS region transcription start site region 13698
Tssr8818 1 133661031 to 133661054 23 + TSS region transcription start site region 8818
Tssr13699 1 133661345 to 133661386 41 - TSS region transcription start site region 13699
Tssr13700 1 133661387 to 133661399 12 - TSS region transcription start site region 13700
Tssr8819 1 133664410 to 133664419 9 + TSS region transcription start site region 8819
Tssr8820 1 133664420 to 133664442 22 + TSS region transcription start site region 8820
Tssr8821 1 133664444 to 133664464 20 + TSS region transcription start site region 8821
Tssr8822 1 133668007 to 133668025 18 + TSS region transcription start site region 8822
Tssr13701 1 133670445 to 133670464 19 - TSS region transcription start site region 13701
Lax1 1 133679091 to 133690108 11017 - protein coding gene lymphocyte transmembrane adaptor 1
Tssr13702 1 133689925 to 133689936 11 - TSS region transcription start site region 13702
Tssr13703 1 133689947 to 133689962 15 - TSS region transcription start site region 13703
Tssr13704 1 133690002 to 133690016 14 - TSS region transcription start site region 13704
Tssr13705 1 133690061 to 133690072 11 - TSS region transcription start site region 13705
Tssr13706 1 133690090 to 133690097 7 - TSS region transcription start site region 13706
Tssr13707 1 133690100 to 133690115 15 - TSS region transcription start site region 13707
Tssr8823 1 133694750 to 133694764 14 + TSS region transcription start site region 8823
Atp2b4 1 133702674 to 133801038 98364 - protein coding gene ATPase, Ca++ transporting, plasma membrane 4
Tssr13708 1 133719112 to 133719116 4 - TSS region transcription start site region 13708
Mir6903 1 133726558 to 133726645 87 - miRNA gene microRNA 6903
Cpgi753 1 133736231 to 133736405 174 CpG island CpG island 753
Tssr13709 1 133736365 to 133736414 49 - TSS region transcription start site region 13709
Tssr13710 1 133737986 to 133737990 4 - TSS region transcription start site region 13710